Pseudescherichia vulneris: LMA04_05310
Help
Entry
LMA04_05310 CDS
T08658
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
pvj
Pseudescherichia vulneris
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvj03009
]
LMA04_05310 (rlmC)
Enzymes [BR:
pvj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
LMA04_05310 (rlmC)
Ribosome biogenesis [BR:
pvj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LMA04_05310 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_12
Methyltransf_15
Cons_hypoth95
Methyltransf_4
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
WAH53466
LinkDB
All DBs
Position
complement(1080694..1081827)
Genome browser
AA seq
377 aa
AA seq
DB search
MQCALYDAGRCRSCQWIDQPVPQQLATKMASLHALLDGLPVAEWCTPVSGPEQGFRNKAK
MVVSGSVEKPLLGMLHRDGSPEDLTGCPLYPASFYPVFAALKPFIAQAGLTPYNVARKRG
ELKYLLLTESQLDGGLMLRFVLRSEAKLDQLRAALPALQAELPQLKVISVNIQPVHMAIM
EGEQEIWLTDQRALAERFNGVPLWIRPQSFFQTNPSVAASLYATARDWVRALPVQHMWDL
FCGVGGFGLHCATPEMTLTGIEIAPEAIACAKQSAGELGLHNVHFQALDSTAFATGQGAV
PDLVLVNPPRRGIGKPLCDYLSAMAPKWIVYSSCNAETMAKDIRALPGYRIERVQLFDMF
PHTVHYEVLTLLVREVG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgccctttatgacgccggtcgctgtcgctcctgtcaatggatcgaccagccg
gtcccgcaacagcttgccactaagatggcgagcctgcatgcgctgctggacggtctgccg
gtcgccgagtggtgcacgccggtcagcggcccagagcagggattccgtaataaagccaag
atggtggtgagcggcagcgtcgagaagccgctgctggggatgctgcaccgcgacggctcg
ccggaggatctcaccggctgtccgctctatccggcgtcgttctacccggtctttgccgcc
ctgaagccctttattgcccaggcgggcctgacgccctataacgtggcgcgcaaacgcggg
gagctgaaatacctgctgctcaccgagagccagctcgacggcggcctgatgctgcgcttt
gtgctgcgctcagaggccaagcttgaccagcttcgcgccgcgctgcctgcgctgcaggcc
gagctgccccagctgaaggtgatctcggttaacatccagccggtgcatatggcgattatg
gagggggagcaggagatctggctcaccgaccagcgagcgctggcggagcgctttaacggc
gtgccgctgtggatccgccctcagagcttcttccagaccaaccccagcgtggcggcgagt
ctctacgccaccgcccgcgactgggtacgggcactgccggtgcagcacatgtgggatctc
ttctgtggcgtcggcggctttggcctgcactgtgcaacgccggagatgacgctgaccggc
attgagatcgccccagaggctatcgcctgcgcgaagcagtctgctggcgagcttggcctg
cataatgtacatttccaggcgctggactctaccgcgttcgccacggggcagggggcggtg
ccggatctggtgctggtcaacccaccgcggcgcggcatcggcaagccgctgtgcgactac
ctgagcgcaatggcccctaaatggatcgtctactccagctgcaacgccgaaacaatggcg
aaagatatccgtgcgctaccggggtaccgtatcgaacgcgtgcagctgttcgatatgttc
ccgcatacggtgcattatgaggtgttgacgttgttggtgcgggaagtagggtag
DBGET
integrated database retrieval system
