Pseudescherichia vulneris: LMA04_10400
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Entry
LMA04_10400 CDS
T08658
Name
(GenBank) efflux RND transporter permease subunit
KO
K18142
multidrug efflux pump
Organism
pvj
Pseudescherichia vulneris
Module
pvj_M00696
Multidrug resistance, efflux pump AcrEF-TolC
Brite
KEGG Orthology (KO) [BR:
pvj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvj02000
]
LMA04_10400
01504 Antimicrobial resistance genes [BR:
pvj01504
]
LMA04_10400
Transporters [BR:
pvj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LMA04_10400
Antimicrobial resistance genes [BR:
pvj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LMA04_10400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF3561
Motif
Other DBs
NCBI-ProteinID:
WAH54392
LinkDB
All DBs
Position
complement(2151538..2154660)
Genome browser
AA seq
1040 aa
AA seq
DB search
MAKFFIDRPIFAWVLAIILMLAGALAVIKLPVAQYPTIAPPAIAINATYPGADAQTVQDT
VTQVIEQNMNGLDNLMYMSSTSDSSGGVTVTLTFNSGTDPDIAQVQVQNKLQLAMPLLPQ
EVQQQGINVKKSSSNFLLVMGFISDDGSMSQDDIADYISSNIKDPVSRTEGVGDVQLFGA
QYAMRIWLDPNKLNQYQLTTLDVVNEIKAQNSQIAAGQLGGTPSPATQQLNASIIAQTRL
RTPEEFGNITLKVQADGSRVLLRDVARIERGGENYNVVARYNGKPSAGLGIKLATGANAL
STAEAVKQQMAHLQTYFPHGLKLVYSYDTTPFINISIREVFKTLIEAIVLVFLVMYLFLQ
NLRATLIPTIAVPVVLLGTFAVLAAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
TDEGLPPKEATQKSMSQIQGALVGIAMVLSAVFIPMAFFGGSTGVIYRQFSITIVSAMAL
SVLVALILTPALCATLLKPVQHDKTHRLFNRFNHLFEQSTRHYTGSVQKLLHCTGRYIVV
YLIIVIGMAVLFLRLPTSFLPEEDQGVFLTMVTLPAGATEARTEKIMRQVTDYYLTKEKN
NVESVFTVTGFGLNGKGQNNGLAFVRLMPWAQREAKEDRVGAIVGRATKAFSRIKDGMVF
AFNLPAITELGTATGFDFELIDQAGLGHTALTAARNQLLMQAAQHPDMLVRTRPNGLEDM
PQFKLNVDQEKAQALGVSLSDINSTIATALGSTYVNDFIDNGRVKKVYAQADAPYRMMPD
DINTWYVRNQAGGMVPFSSFSSAGWIQGSPRLERYNGLPSMEILGEAAPGKSSGEAMKLM
ETLASQLPAGVGFDWTGMSYQERLSGNQAPALYAISLVVVFLCLAALYESWSIPFSVMLV
VPLGVVGALLAASLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEHKSLIEAT
LEAVRMRLRPILMTSLAFILGVMPLVLSTGAGSGAQNAVGTGVMGGMIAATLLAIFFVPV
FFVVVCRRLTKSSHVITQKQ
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttctttatcgatcgcccgattttcgcttgggtactggcgattattttaatg
ctggcaggcgcgctggccgtcattaagctgcccgttgcgcagtatcctacgattgcgccg
cctgccattgccattaacgctacctatcccggtgcggatgcgcagaccgtgcaggacacg
gttacccaggtgatcgaacagaacatgaacggcctcgataacctgatgtatatgtcctcg
accagcgactcctcaggcggcgtcacggtaaccttaacctttaattccgggaccgatccc
gatatcgcccaggttcaggtgcagaacaagctgcagcttgccatgccgctactgccacag
gaagttcagcagcagggtattaacgttaaaaaatcgagcagtaacttcttgttggtcatg
ggctttatttcagatgatggcagcatgtctcaggacgacattgccgactacatctcctcc
aatatcaaagatccggtgagccgtactgagggggtcggtgacgtacagctgtttggcgcg
cagtatgcgatgcgcatctggctcgatcccaataagctcaatcagtatcagctcaccacc
ctcgacgtggttaacgaaatcaaggcgcagaacagccagattgccgccgggcagctgggg
ggaacgccctcgccagcgacgcagcagctcaacgcctcgattatcgcccagacccgcctg
cggacgccggaggagtttggcaacataacgctaaaagtgcaggcggatggttcgcgcgta
ttgctgcgcgacgttgcccgcattgaacgcggcggcgagaactacaacgttgtagcccgc
tataatggcaaaccctcggcaggactgggtattaagctggcgacaggagcgaatgcgctc
tccactgccgaggcggtaaaacagcagatggcgcacctgcaaacctatttcccgcacggc
ctgaagctggtctacagctatgacacgacgccgtttatcaatatctccatccgggaggtg
ttcaaaacgttgattgaagcgatcgtgctggtctttttggtgatgtatctcttcctgcaa
aacctgcgcgctacgctgatccccaccatcgccgtaccggtggtgctgctgggtaccttt
gccgtgctggcggcgtttggctactccatcaatacgctcaccatgtttgggatggtgctc
gccatcggcctgttggtggatgatgcgattgtggtcgtcgaaaacgtcgagcgcgtaatg
actgacgaagggctgccgccaaaggaggccacgcaaaagtcgatgagccaaatccagggt
gcgctggtggggattgcgatggtgctctctgccgtgtttatcccaatggccttttttggc
ggatcgaccggggtaatctaccgccagttctctatcactatcgtctcggcgatggcgctc
tcggtgctggttgccctcattctcacccccgcgctatgtgcgacgctgcttaagccggtg
cagcacgataagacccatcggctatttaaccgcttcaatcacctgtttgagcagagcact
cgccactacaccggcagcgtgcagaagctgctccactgtacggggcggtatatcgttgtt
tatctcatcatcgtcatcggaatggcggtgctgttcctgaggctgccgacctcgttttta
cccgaagaggatcagggcgtatttctgacgatggtcacgctgcccgccggagcgactgag
gcgcgaacggaaaagatcatgcgtcaggtaacggattactatctgacaaaagagaaaaac
aacgttgagtcggtctttaccgtcactggctttggcctgaacggtaaagggcagaacaac
ggcctggcctttgttcgcttaatgccgtgggcgcagcgtgaggcgaaagaggatcgcgtt
ggcgctatcgtaggccgcgcgacaaaggccttcagccgcatcaaggatggcatggttttc
gccttcaacctgcctgccattaccgagctgggcaccgcgacggggtttgactttgagctg
atcgatcaggcgggactggggcatacggcgttgaccgccgcgcgtaaccagctgttgatg
caggcggcacagcatccagacatgctggtcaggacgcggcccaacggcctggaggatatg
ccccagttcaaactcaacgtcgatcaggagaaagcgcaggcgctgggcgtctcgttgagt
gacatcaacagcacgatcgccaccgcgctgggcagcacctacgttaacgactttatcgat
aacgggcgcgtgaaaaaggtctatgcccaggccgatgcgccctatcgcatgatgccggat
gacattaacacctggtatgttcgtaatcaggccggaggcatggtgccgttctccagcttc
tccagcgcaggctggatccaggggtcgcctcgcctggaacgctataacggcctgccctct
atggagatcctcggcgaggctgcgccgggcaaaagcagcggcgaggcgatgaagctcatg
gagacgctggcatcgcagttgcctgcgggcgtcggctttgactggaccggcatgtcttat
caggagcgtctctcaggtaaccaggctccggcgctgtatgccatttcgctggtggtagtg
ttcctctgtctcgctgcgctgtatgagagctggtcgattcccttctcggtcatgctggtg
gtgccgctgggcgtcgtgggagcgttgctggcggctagcctgcgcggcctgagtaacgac
gtctattttcaggtaggcctgcttaccactattgggctatcggccaagaacgccattctg
atcgtcgagtttgccaaagacctgatggataaagagcacaaaagccttatcgaggccact
cttgaagcggtcagaatgcgtctgcgtcccatcctgatgacctcccttgcgtttatctta
ggcgtaatgccgctggtattaagtactggcgcaggcagcggcgcacaaaatgcggtcggc
acgggggtcatgggggggatgattgcggcgacgctgctggcgatattctttgtgccggta
ttttttgtcgtggtttgtcggcgtttaacaaaatcgagccacgttattacgcagaagcaa
taa
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