Pseudomonas viciae: EPZ47_06965
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Entry
EPZ47_06965 CDS
T07167
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pvk
Pseudomonas viciae
Pathway
pvk01501
beta-Lactam resistance
pvk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EPZ47_06965
01503 Cationic antimicrobial peptide (CAMP) resistance
EPZ47_06965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvk03036
]
EPZ47_06965
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvk02000
]
EPZ47_06965
01504 Antimicrobial resistance genes [BR:
pvk01504
]
EPZ47_06965
Chromosome and associated proteins [BR:
pvk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EPZ47_06965
Transporters [BR:
pvk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EPZ47_06965
Antimicrobial resistance genes [BR:
pvk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EPZ47_06965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
BSH_CusB
HH_YBHG
Beta-barrel_RND_2
BSH_CzcB
HH_EMRA
HH_CzcB
HH_CyaD
YknX_C
Motif
Other DBs
NCBI-ProteinID:
QBZ88457
LinkDB
All DBs
Position
complement(1519833..1520990)
Genome browser
AA seq
385 aa
AA seq
DB search
MQFKPAVTALVTAIALASLLSGCKKEEAAPAPPPPQVGVVTLKTQPFTLTSELPGRTSAF
RVAEVRPQVNGIILKRLFKEGADVKAGQQLYQIDPAVYEATLKSAEANLRSTKSISDRYQ
QLVKEQAVSRQEYDTALANRLESEANLQTAQINVRYTKVYAPISGRIGRSSVTEGALVSN
GQTDALATIQQLDPIYVDVTQSSVELLQLRRELESGRLQKAGDNAAMVKLTLEDGSQYAH
EGKLEFSEVSVDQTTGSVTLRAVFPNPDHTLLPGMFVHAQLQSGVNSAAILAPQQGVTRD
LKGTPTALVVGADNKVELRQLKASRTVGSQWLIEDGLKAGDRLITEGLQYVRPGVEVKAT
EATNVGAKNPAPAQAADKAAGGKGE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcaagccagctgttaccgctctggttaccgccatcgccctggcatcgctgctc
agcggatgcaaaaaggaagaggctgcgcctgctcctccccctcctcaggtcggcgtcgta
accctcaagactcaacccttcaccctgacgtcagagcttccggggcgcaccagtgcgttc
cgcgtcgccgaagttcgcccacaggtcaacggcatcatcctcaagcgtctgttcaaggaa
ggcgccgacgtcaaggccggccaacagctgtaccagatcgacccggccgtgtacgaagcg
acgctcaagagcgccgaagccaacctgcggtccaccaagtcgatttccgatcgttaccag
caactggtcaaggaacaagccgtcagccgccaggaatacgacaccgccttggccaaccgc
ctggagtcggaagccaatctgcagaccgcccagatcaacgtgcgctacaccaaggtctac
gcaccgatctccggtcgcattggtcgctcctcggtaaccgaaggtgcgttggtgagcaac
ggtcagaccgacgccctggcaaccatccagcaactggacccgatctacgtcgacgtgacg
caaagctcggtagagctgctgcagctgcgccgtgagctggaaagcggccgcttgcagaaa
gccggtgacaacgccgccatggtcaagctgaccctggaagacggcagccaatatgcccat
gagggcaagctggagttctccgaggtgtcggtcgaccagaccaccggctcggtgaccttg
cgcgccgtgttccctaatccggatcacaccttgctgcccggtatgttcgtccacgcacaa
ctgcagtccggtgtgaacagcgcggcgatcctcgccccgcagcaaggcgtgacccgcgac
ctcaaaggcacgccgaccgccctggtggtaggcgcggacaacaaggtcgagttgcgtcag
ctcaaggccagccgcaccgtcggcagccagtggctgatcgaagacgggctcaaggccggc
gatcgcttgatcaccgaagggttgcagtacgtacggccaggggtggaagtcaaagccacc
gaagccaccaatgttggtgccaagaacccggcccccgctcaggcagctgataaagcagcc
ggcggcaaaggggagtaa
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