Pseudomonas viciae: EPZ47_11885
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Entry
EPZ47_11885 CDS
T07167
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pvk
Pseudomonas viciae
Pathway
pvk01501
beta-Lactam resistance
pvk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EPZ47_11885
01503 Cationic antimicrobial peptide (CAMP) resistance
EPZ47_11885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvk03036
]
EPZ47_11885
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvk02000
]
EPZ47_11885
01504 Antimicrobial resistance genes [BR:
pvk01504
]
EPZ47_11885
Chromosome and associated proteins [BR:
pvk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
EPZ47_11885
Transporters [BR:
pvk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EPZ47_11885
Antimicrobial resistance genes [BR:
pvk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EPZ47_11885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
BSH_CusB
BSH_CzcB
CzcB_C
Beta-barrel_RND_2
YknX_C
HH_EMRA
HH_YBHG
HH_AAEA_pHBA
BSH_YknX
Motif
Other DBs
NCBI-ProteinID:
QBZ89378
UniProt:
A0A4P7PFE0
LinkDB
All DBs
Position
complement(2578775..2579932)
Genome browser
AA seq
385 aa
AA seq
DB search
MPRNPFATLGLLLGALLLSACDSSSAPKDEAPLATVTVETIEARPLSISSELSGRIAAPR
IAEVRARVPGVVLQRVFREGSDVKKGDVLFRIDPAPFKADLDSAEAALRKAEANAFQARL
QAQRYAQLIDDNAISGQDYDNARAAVRQTAADVAANKAAVERARLNLGYATVTAPIAGRI
GRALVTEGALVGQNETTPLALIQQLNPIHADLTQSTRELNDLRRALRSGQLQQVGQDQAK
ATLIQDDGSLYPLPGKLLFTDISVDPGTGQITLRSEFPNPDLDLLPGSFVRVRLEQAFDR
QGISVPQRAIQRDSSGVAQVLLLDAQQQVRVQPVELGAVQNDRWIVIHGLKSGDRIVVQG
LQHARPGEKVRIDDTPLPLAQAPGQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaatcctttcgccaccctgggcttgctgctcggggcgctgctgttgagcgcc
tgcgactcatcctcggcacccaaggacgaagcgccgctggccaccgtgaccgtcgaaacc
atcgaggcccggccgctgtccatcagcagcgaactgagcgggcgcattgccgcgccgcgg
atcgccgaagtccgcgcgcgcgtgcccggtgtggtgttgcagcgggtctttcgcgaaggc
agcgacgtaaaaaaaggcgacgtgctgttccggattgatccagcgccattcaaggccgac
ctggacagcgccgaagcggcgctgcgcaaagccgaggccaacgcgttccaggcacgcttg
caagcgcagcgttacgcgcaactgatcgacgacaacgccatcagcggccaggactacgac
aacgcccgcgccgccgtccgccagaccgccgccgatgtcgccgccaacaaggccgcggtg
gaacgggccaggctgaacctgggttatgccaccgtcaccgcaccgattgccgggcgcatc
ggccgggcactggtaaccgaaggcgccctggtggggcagaacgaaaccacgccgctggcc
ctgatccagcagttgaacccgattcacgccgacctcacgcaatcgacccgcgagctcaac
gatttgcgtcgtgccctgcgctccggccagttgcagcaggtcggccaggatcaggcaaaa
gccacgttgatccaggacgacggcagtctttatccgctgcctggcaagttgctgttcacc
gacatcagcgtcgacccgggcaccggccagatcaccctgcgcagcgagtttcccaacccc
gacctcgacctgctgccgggcagcttcgtgcgcgtgcgtctggagcaggccttcgaccgg
caaggcatcagcgtgccgcaacgggcgatccagcgtgacagctcgggcgttgcccaggtg
ttgctgctcgacgcgcaacagcaggttcgcgtgcaaccggtggaactgggcgccgtacag
aacgatcgctggatcgtcatccatggcctgaagtccggcgaccgcatcgtggtgcaaggc
ctgcaacacgcacggcccggtgaaaaagtccggatcgacgatacccctcttccacttgcc
caggcacctggtcagtaa
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