Pseudomonas viciae: EPZ47_23190
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Entry
EPZ47_23190 CDS
T07167
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pvk
Pseudomonas viciae
Pathway
pvk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EPZ47_23190 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvk03400
]
EPZ47_23190 (nth)
Enzymes [BR:
pvk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EPZ47_23190 (nth)
DNA repair and recombination proteins [BR:
pvk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EPZ47_23190 (nth)
Prokaryotic type
EPZ47_23190 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Ogg-HhH
DprA_N
DUF2400
Motif
Other DBs
NCBI-ProteinID:
QBZ91479
UniProt:
A0A4P7PKW3
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All DBs
Position
5249878..5250516
Genome browser
AA seq
212 aa
AA seq
DB search
MNAAKRLEIFRRFHEDNPEPKTELAYSSPFELLIAVILSAQSTDVGVNKATAKLFPVANT
PEAIHALGVEGLSEYIKTIGLFNSKAKNVIETCRLLIERHGSEIPQTREALEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGLAPGKNVVEVEKKLMKFVPKEFLLDSHHWLI
LHGRYVCLARKPRCGSCRIEDLCEYKHKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgcaaaacgcctggaaatatttcgccgttttcacgaagacaacccggaaccg
aaaaccgaactggcctactcctcgccattcgagttgttgatcgcggtgattctgtcggcc
cagtccactgacgtcggcgtcaacaaagccacggccaaactgtttccggtggccaacaca
ccggaggcgatccatgccctgggcgtcgaagggctgtccgaatacatcaagaccattggc
ttgttcaacagcaaggcgaaaaacgtcatcgaaacctgccgcctgctgatcgagcgccac
ggcagtgaaatcccacagactcgcgaagcgctggaagcccttccaggcgtgggccgcaaa
accgccaacgtcgtgctcaatactgcgtttcgtcagttgaccatggcggtcgacacccac
atcttccgcgtcagcaaccgcaccgggctggcgccgggtaaaaacgtggtggaggtggag
aaaaaactgatgaagttcgtacccaaggaatttctcctggactctcatcactggctcatt
ctccatgggcgatacgtgtgcctggcacgcaagccccgctgtggcagctgccgaatcgaa
gacttgtgcgaatacaagcacaagacctccgacgattga
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