Pseudomonas viciae: EPZ47_27795 Help Entry EPZ47_27795       CDS       T07167                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism pvk  Pseudomonas viciae Pathway pvk03030   DNA replication pvk03410   Base excision repair pvk03420   Nucleotide excision repair pvk03430   Mismatch repair Brite KEGG Orthology (KO) [BR:pvk00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     EPZ47_27795 (ligB)    03410 Base excision repair     EPZ47_27795 (ligB)    03420 Nucleotide excision repair     EPZ47_27795 (ligB)    03430 Mismatch repair     EPZ47_27795 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:pvk03032]     EPZ47_27795 (ligB)    03400 DNA repair and recombination proteins [BR:pvk03400]     EPZ47_27795 (ligB) Enzymes [BR:pvk01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      EPZ47_27795 (ligB) DNA replication proteins [BR:pvk03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      EPZ47_27795 (ligB) DNA repair and recombination proteins [BR:pvk03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      EPZ47_27795 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      EPZ47_27795 (ligB)    MMR (mismatch excision repair)     DNA ligase      EPZ47_27795 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       EPZ47_27795 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  OB_DNA_ligase DNA_ligase_aden HHH_5 RNA_ligase TilS Motif Other DBs NCBI-ProteinID:  QBZ92331 UniProt:  A0A4P7PN08 LinkDB All DBs Position 6238417..6240090 Genome browser AA seq 557 aa AA seqDB search MLPLLRTIACFMFIVSPVLATPCPDWPTERAQAEIIALQQQIDAWDDTYHRLGRSLVADE LYDQSRLQLGQWRSCFGLDAPGNPLRSAGGKVPHPVLHTGLDKLKDADAVKAWLHGRADV WAQPKVDGVAVTLIYREGRLHQAISRGDGVQGQDWTWAVHKISSIPQRLRQPLDLLVQGE LYWRLNAHVQAANGSLNARATVAGLMARTNLTAQEGTDIGLFVWDWPEGPDTLPERMAAL SELGFADTLDYNQPVQTLTEAQHWRDHWYRTPLPFASDGIVLRQSRRPPADRWQARAPFW SMAWKYPYAQVLAEVRKVRFNVGRTGRITPVLELEPVMLDDRRIRRVSVSSLKRWEEMDI RPGDRVAISLAGLTIPRLDSVVLRSVERRDLNAPTAADYHFLSCWQPTPGCESQFLARLN WLSGKHGLALPHIGPGTWEKLLAAGQLDGLLDWLTLDAAELANIAGFGERSSARLLASLH SARQRPFEQWLKALGLPPVGQARLEGPWQKLAERNTEQWQAEAGIGPGRAEQLSAFFRDP QVLALSEVLRTAGVDGF NT seq 1674 nt NT seq  +upstreamnt  +downstreamnt atgctgccgttactccgtacaatcgcctgtttcatgttcatcgtttcccccgtcctcgcc acgccctgccccgattggcccaccgaacgcgcccaggcggagatcatcgcgctgcagcag caaatcgacgcctgggatgacacgtatcaccgtctcggccgctcactggtagccgacgaa ctgtacgatcagtcccgcctgcaattgggccaatggcgcagttgtttcggtcttgacgca ccaggcaaccctttacgctcggcgggtgggaaggtgccgcaccctgtccttcataccggc ctggacaaactgaaagatgccgatgccgtgaaggcctggttgcacggccgggcggacgtc tgggcccaaccgaaagtcgatggtgtagcggtgaccctgatttatcgggagggtcgcctg caccaggcgatcagccgcggcgatggcgtccaagggcaagactggacctgggcggtgcac aagatcagcagcatcccccaacggctgcgccagcctttggacctgctcgttcagggcgag ctgtactggcgactgaacgcccatgtccaggccgccaacggtagcctcaacgcccgggcg accgtggcgggcctgatggcgcgcacaaacctgaccgcgcaagagggcacggacatcggc ctgtttgtctgggactggcccgaaggaccggacaccttgcccgagaggatggccgcgcta agtgagctgggcttcgctgacaccctcgactacaaccagcccgtccagacattgaccgag gcccaacactggcgcgaccactggtatcgcacaccgctgccattcgccagcgacgggatc gtcctgcgccagagccgccgcccacccgccgaccgctggcaggccagggcgccgttctgg agcatggcctggaaatacccgtacgcccaagtcctggccgaggtgcgcaaggtgcgtttc aacgtcggccgtaccgggcgcatcacgcccgtgctggagttggagcccgtcatgctcgac gaccggcgaatccgccgggtgagtgtcagttccctcaagcgctgggaggagatggacatc cgcccgggcgatcgagtcgccatcagcctggccgggctgaccattccacgcctcgacagc gtcgtgctgcgcagcgtcgagcgccgggacctcaacgccccgacggcagccgattatcac ttcttgagttgctggcaacccacacccggttgcgaaagccagttcctcgcgcgcttgaat tggcttagcggcaagcacggactagccctgccccatataggcccgggtacctgggaaaaa ctcctggccgccggccaactcgacggattactcgattggttgaccctcgatgccgccgag cttgctaacattgccggcttcggcgagcgcagcagcgcccgcctgctcgccagcttgcac agtgctcggcaacgccctttcgagcaatggctcaaggcccttggcctgccgcctgtcggt caagcccgactggaagggccgtggcagaagctggccgagcgcaacaccgagcaatggcaa gccgaagccggcatcgggccgggacgcgccgagcaattgagcgctttcttccgcgacccg caggtgttggctttgagtgaagtattacgcactgccggggtcgacggtttttga

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