Penaeus vannamei (Pacific white shrimp): 113802497
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Entry
113802497 CDS
T06111
Name
(RefSeq) serine-rich adhesin for platelets isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03440
Homologous recombination
pvm03460
Fanconi anemia pathway
pvm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113802497
09124 Replication and repair
03440 Homologous recombination
113802497
03460 Fanconi anemia pathway
113802497
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvm01009
]
113802497
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvm04121
]
113802497
03036 Chromosome and associated proteins [BR:
pvm03036
]
113802497
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113802497
Enzymes [BR:
pvm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113802497
Protein phosphatases and associated proteins [BR:
pvm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113802497
Ubiquitin system [BR:
pvm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113802497
Multi subunit type E3
BRCC complex
113802497
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
113802497
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
113802497
BRCA1-A complex
113802497
BRCA1-B complex
113802497
BRCA1-C complex
113802497
BRCA complex
113802497
FA (Fanconi anemia) pathway
Downstream FA components
113802497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-RING_6
zf-rbx1
BRCT_3
Baculo_IE-1
RTT107_BRCT_5
Sina_RING
zf-RING_10
zf-ANAPC11
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
113802497
NCBI-ProteinID:
XP_027208904
LinkDB
All DBs
Position
34:complement(311493..331388)
Genome browser
AA seq
2289 aa
AA seq
DB search
MEERLNQMSAVLQAMQKTLECNICLDLMNKPLTTKCGHSFCSECIHQVVKGPRSSAQCPL
CMTNITRRSLGHNNKITNLVIAVRKIIASIKKDCCFEVTPSKYRPRPRPVISPEDDDSEN
EENDEPRRGTRKRGVTSHYNPEVHVPKPRAKSAKQRILATDNGQELSLHTDVRSDRFLKS
EEGGTDQNRAVVDVISQEHSYSSPTKQEPVVRTSLIPTISRGRGGRGGVSLRGKSKMTST
SLKGKADAHMSGKPFGNGMKTGPSTYSTKKAEQQLEKNLLSVSQQDNGCIFPGEAMVSVQ
EDTDHLSKKLGRVEPADKVANWLTTSSEVGFRIGVTQSTDTLSTESEDNQLYQKAKDKGP
SNSKLIEPKVNVMKKGNKKFIYPNEGTELSESKSATTTSSSQSVKKFFKLKVNEVVSSTL
TESHLPIVKHDAKHDQSMLPQASSDDPYSFIPSQKTPKQLKTVEKRGQEVKSRARGMLKM
SRGRVRGRGRGRGLIQAESSSTEPAGIFDESCVSTVDTTMLKQSTPLAKVNKMKQDIDIS
VIRPPDTVINFADNEPLPSVIVQTHADIEDDYGIPDSCPVNTKDEFDVLVSEAKDVCKTT
PQGTQQIDGPEIDAEADLLFVTPAQGPDQPLDIITGKPKSAEDPSQQANTEAGCRTKKKR
ASDDSDSGNERSKRARVKKSSSSSGSDAESTQSSKKSKTKAEKAKEEVEALCSMFEEIED
HTLSTVSLVEAEKDNKKQEKEKEESMRSNISVFDKTLENTKLNRSIASTEGGKSAMPPPK
APVRNKKVKFHDSLEENSAPSTSKDSLSSVATRSAGKKTIPRISHNARYASEMKLVEPSK
NLAVSVSVKDTKSPGWSHVAGARKDLKTRHTSLNITGGEQRNINDSRTEGGTSVLSSKIA
PSSEESEVSIDDQTQDYDVEHLCSSQSKKERVKKLKEIVSQLNKPEEESETVATHGNNVN
SKETKPAIKESDSEKNKLGVQELNKGSKSAVKEISGGEIKNFSTEVSSKNTKSADKEKEV
RSKLIKSGTKDASDKESKSFGKKEDTYENESTVKQIKSKENRCDTKLVLPPTACTTSIES
KAAQKQGIDEKPKENSCHSSALLNPAETEPFDCTEEPTRKSSVSSSSSDSTSNQVKGRLK
RPTRAEQRNITSRLSRTSARQLNSSSSKLSRKTFSLSVNTQDLSTLHSDYEILSSLEDTE
KPNCVPDPSGQKLVTSSNKVPEALKPKKSASTSSETSSVISKPRPPHHAMSSSTASDLLD
NEKDKKDISPPATSLPTEATYSNQLVSEDSKVIPFRSVGPLCSKRCDEAGKGEAVALVGS
TNRDLCLHAIPCEVYQVLMKYMTLLVTQQDNHSVCCGSSNLPKLLNSKEVQTSPMSEATE
EKMHVEKKLQLKSSDSTSLVKPNSESDSQVIPNSCETQEMDIAIPLPASIGVKTKARKDA
AADTETVVEAENDRSNLICLREEENKDTVTVKSALSSEISLDKNCLMPQKKKFDNASSSQ
NSDSQSSQMSTSLLAAPDVIETKHGRLTRSTNSSGDANSQAGEGRSVEKYDRGQHASQKV
KERAGVGKTMVSKNNLVEVEKENLKNDSTLPVAISRPRRKPLQSGQPVIENIMSQLTKEE
KRQVAEKIELSQIQNQSSHNIQKSLSTQNRPANSKPLFMSDESSHASRKQKDVLTVGSKN
LEEEQEESDSDSPLKASLESKRQTFKRIRRPSSGSSSDDSDSDSVQPRKRKAKTISSSDS
IQMSGRFKEGKSKENLEQHQLDSEEMRDLERLDKNVWEFFGHPDEDLLTNKDDDDKSSHV
SIDDPSQKKDIIEFENDALVPSLPSDEDIPSTEDVMRNVQMDMDLVKKMRQQGQGDPEVI
SLISQEIQETAPSTQKPTFSASTKSLFNKVDKNLTKAEDLLCSGNSLFGGIVTPVDEPKS
NSTKTTTVGNTRTKSNKEKAEMVDESDRDTEEDTENMSHSSAYSSQSEAISTQKREEVKD
EVEMLKARVRELEAVVKKKETEESAKRNEDPEDDVLPPTCPTEISDTESEELFSSLPDLT
ACTQPKLPVSGFEKKTTKLSMSGPPMLVCTGLNSSELSKVQDLVNKLAPPGTKLMKSWVD
GITHVVVKTDADRMAQRTLKYLYGVANGCWVVMLEWILDSITLKQLQNEEEYEVLDCTGV
PGPHRARTTITPLFHGCEFYLIPPFMDVTLEQLQEMLEQCGARVVDSLQKFSQSKQSLKL
IVLQTDGDHETDNIWKKHKKVCVAHDWIIECIGMYARICISPYIIGSPSQSHIVASNLPY
ALMQETQEL
NT seq
6870 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcgactcaaccaaatgagtgctgtgctccaggccatgcagaaaactttggag
tgtaatatatgccttgatttgatgaacaagccgctgacaacaaaatgtggacactccttc
tgttcagagtgtattcatcaagtggtaaaaggcccacggagctcggcacaatgtcctttg
tgtatgactaacatcactcgtcgttctcttggtcacaataataaaattactaatttagtg
attgctgtgaggaagataattgcaagcattaagaaggattgctgctttgaagtaacgccc
tcaaaatatagaccaagacctcgtcctgttatcagtcctgaagatgatgattctgaaaat
gaagagaatgacgagccgagaagaggaacccgcaagaggggtgtcactagccactacaac
cctgaggtgcatgtgccaaagcccagggccaagtcagcaaagcagagaattctggccaca
gataatggccaagagctgagtcttcacactgatgtgaggtcagacaggtttcttaagagt
gaagagggtggcacagatcaaaaccgtgctgtagtggatgtcatctcccaggagcactcc
tactcgtcccctaccaagcaggagccagtggtgagaactagtctcatcccaaccataagc
cgagggagaggtggtagagggggagtgtcgctgagaggaaagagtaaaatgacatccaca
agtctcaagggaaaggctgatgctcacatgtcagggaagccttttgggaatggcatgaaa
actgggccttccacatacagcactaagaaagctgaacagcaattggagaagaatctgtta
tctgttagccaacaagacaatggctgcatattccctggtgaggcaatggtgtctgtacaa
gaagatactgaccatttaagtaaaaaattgggtagggtagaaccagctgacaaagtagca
aattggttaaccaccagtagcgaagtgggattccgcattggggtgacacagtcgacagac
actctctccacagaatctgaggacaatcagttatatcagaaagctaaggataaaggcccc
tctaattccaagcttattgaacctaaggtgaatgtaatgaaaaagggtaataaaaaattt
atttatcctaatgaaggcacagaactttcagaaagcaagagtgcaacaactacctcatct
tctcagtctgtgaagaaattttttaagttaaaggtaaatgaggtagtttcttcaacatta
acagagagccacctacctatagtgaaacatgatgcaaaacatgatcagtcaatgctccca
caggcaagttcagatgatccatatagttttattcccagccagaaaacgcccaaacagttg
aagactgttgaaaagcgagggcaggaagtcaagtcaagagcaagggggatgctcaaaatg
agtcgtggtagagtaagagggagagggagagggagaggtctgatccaagcagaatcaagt
tcaacagagcctgctggaatttttgatgagtcctgtgtaagtactgttgatacaactatg
cttaaacagagcactcccctggccaaagtgaataaaatgaaacaagatattgatatcagt
gtgattagacccccagatactgtcattaattttgctgacaatgagccactgccatccgtt
attgtacagactcatgcagacattgaggatgactatggaattccagacagctgtcccgtc
aacacaaaggatgagtttgatgtccttgtgtcagaggcaaaagatgtctgcaaaactacc
cctcaaggtactcagcaaattgatggaccagaaatagatgctgaagcagatctccttttt
gtgactcctgctcaggggccagaccaaccccttgacatcattacagggaagcctaaatct
gccgaggatccaagccaacaggccaacactgaggctggatgtagaaccaaaaagaagcgg
gcaagtgacgacagtgacagtgggaatgagcgcagtaagagagccagagtaaagaagtcc
agcagcagtagtgggtcagatgcagaaagcacacagagttcaaagaaaagcaaaacaaaa
gcagaaaaggccaaagaagaggttgaagctttgtgttcgatgtttgaagagattgaggat
cacactctaagcacagtatcattggtagaagcagagaaagacaacaaaaagcaagagaag
gaaaaagaggagagtatgaggtcaaatatatcagtatttgataaaacactggaaaacacc
aagctaaatagatccatagccagcacagagggtggtaagagtgccatgccgcctcccaaa
gctccagtaagaaacaagaaagtcaagttccacgatagtttagaagagaatagtgctcca
agtacttccaaagacagtttgtcaagtgtagcaactaggtcagcagggaaaaaaacaatc
cctagaatttcccacaatgcccgttatgcatcagaaatgaagttagtagaacccagtaag
aatttagctgtgtctgtaagtgtgaaagacacaaagtcacctggatggtcacatgtagct
ggtgccaggaaagatttaaaaacacgccacactagcctaaatattactggaggagagcaa
cgtaatataaatgattcaagaacggaaggaggaacatctgtactttctagcaagatagct
ccctcttctgaagaatcagaagtctcaatagatgaccaaacccaagactatgatgtggag
cacctttgctcttctcaaagtaagaaggagagagtcaaaaaactcaaagaaattgtatct
cagttaaataaacctgaggaggagagtgagacagttgcaacacatggaaataatgttaat
agcaaagaaacaaaacctgccatcaaggaaagtgatagtgagaaaaataaacttggtgtc
caagaattgaacaagggaagtaagtctgcagtgaaggaaattagtggtggagaaataaaa
aactttagcactgaggtcagtagcaaaaacactaaatctgctgacaaagaaaaagaagta
aggagtaaactgattaaatctggaactaaagatgcttctgacaaagagtcaaaatctttt
ggaaagaaagaggatacatatgagaatgaatcaactgtaaagcaaataaagagtaaagaa
aatagatgtgacacaaaattagttctacctccaacagcctgtactacaagcattgaaagc
aaagcagcacagaaacaaggcatagatgaaaagccaaaggaaaatagctgtcattcatca
gcactcctcaatccagcagaaactgagccttttgattgcactgaagaacctacaaggaag
tcctcagtgagtagcagttcctcagactcaacttcaaatcaggtaaagggaagattaaag
aggccaacccgagctgaacaaagaaatatcacctcaaggctttccaggacttctgccaga
cagctaaactcaagctcatccaagttgtctagaaagaccttttctctgagtgtaaacacc
caagatctatccactttacatagcgactatgagattctcagctcgcttgaagatactgaa
aaacctaactgtgtgccggatccatcaggacaaaagttagtgacttcgagcaacaaggtg
ccagaagctctcaaaccaaagaaaagtgcttccacctcatcagaaacttcttcagttata
agtaaacctcggccaccccatcatgctatgagttcaagcacagcatcagatctgttagac
aatgaaaaagataaaaaagacatttcaccacccgccacctctttgccaacagaagcaact
tacagcaatcaactggtgtctgaggattcaaaagttatacctttcagatctgttgggcca
ctctgttccaaaagatgtgatgaagcagggaaaggagaagctgttgcattggtgggcagc
acaaatcgtgatctgtgtctccatgctatcccatgtgaagtgtaccaggtgctcatgaaa
tatatgactcttttggtaacacaacaggataatcacagtgtctgctgtggcagttcaaac
ctgcccaaattactgaattctaaggaggtacaaaccagtcctatgtctgaagccactgag
gagaaaatgcatgtagaaaagaaattacagttaaaatccagtgatagcacctccctcgtt
aagcccaactctgagagtgacagtcaggtgattcctaatagctgtgagactcaggaaatg
gacatagcaattcctctgccagcttctattggagtgaagacaaaagctagaaaagatgct
gctgctgacacagaaacagtagtagaagcagaaaatgacagaagtaacttgatttgttta
agagaagaggaaaataaagacacggtcacagtgaagagtgctctgtcatcagaaatttcc
cttgataagaactgtttgatgcctcagaaaaagaagtttgataatgcatcctcaagtcag
aatagtgactcccagagttctcagatgtcaaccagcttgttagctgctccagatgtcatt
gaaactaaacatggtaggctcactagaagcacaaatagttcaggtgatgcaaatagccaa
gcaggggaaggtaggtcagtagaaaaatatgacagggggcagcatgcaagtcagaaagtc
aaggaaagagctggtgtaggcaaaacgatggtgagcaagaataacttggtcgaggtggaa
aaggaaaatttaaagaatgatagcactttacctgttgccattagcaggccaagaagaaag
cctctccaatcaggtcagccagtcatagaaaatatcatgtcacagttaaccaaagaagaa
aagagacaagtagcggaaaagattgaattgtcacaaattcagaaccaaagttctcataat
atccagaaatctctgagcactcagaacagacctgccaatagtaaacctttatttatgagt
gatgaatccagccatgcaagtaggaaacagaaggatgtgttgacagtagggtctaaaaac
ttggaagaggagcaggaggaatcagacagtgacagccccctgaaggcttccctagaatca
aaaagacaaactttcaagaggatccgcagaccgagttctgggtcaagttctgatgatagc
gactcagattcagtccagccacgaaagagaaaggctaaaactatctccagcagtgacagc
atacagatgtctggacgtttcaaggagggaaagagtaaggaaaacctggaacaacaccaa
ttggattcagaggagatgagagacttggagagactggacaaaaatgtgtgggaattcttt
ggccaccctgatgaggatttgctaaccaacaaggacgatgatgacaagagttcacatgta
agtatagatgacccgtcgcagaagaaagacatcattgaatttgaaaatgatgccctagtt
ccatccctcccatcagatgaagatattccaagcactgaggatgtaatgcgtaatgtccag
atggacatggatttagtgaagaagatgcgccagcaaggtcaaggagaccctgaagtgatc
tccctgatttctcaagagatacaagaaacagcaccttctacccagaaacctacgttttct
gctagcacaaagtcattgtttaacaaggttgacaaaaacctgacaaaggctgaggatctg
ctctgtagtggcaacagcctgtttggtggtatagtcacaccagttgatgaaccaaagtcc
aattcaactaaaaccactactgttggcaacacaagaacaaaatctaacaaagaaaaagct
gagatggttgatgaatcagatcgtgatactgaagaagacacagaaaacatgagtcatagc
agtgcttactcatcccagagtgaggccatcagcacccagaaacgggaggaagttaaggat
gaggtggaaatgctaaaggcccgagtgcgtgagttagaagcagtggttaagaagaaagaa
acagaggaatcggcaaagagaaatgaagacccagaagatgatgttttacccccaacgtgt
ccaacagaaattagtgatactgagtctgaagagcttttctcaagccttccggacttaacg
gcttgcacacagccgaagttgccggtctcaggattcgagaaaaagactacaaaactaagc
atgagcggaccccccatgcttgtgtgcacaggactgaactcatcagaacttagcaaagtg
caggatcttgtaaacaaattagcacccccggggacaaagctcatgaagtcctgggttgat
gggattacccatgtggtggtgaagactgatgctgatcgaatggctcagcgtaccttaaag
tacctgtatggagtcgcaaatgggtgctgggttgtcatgctggaatggatccttgattca
atcacgttgaagcagctccagaatgaggaagagtatgaagtgttagattgcacaggggtt
cctgggccccatcgagcacgcacgaccataactcctcttttccacggttgtgaattctac
ctcataccaccttttatggatgttactttagagcagcttcaggagatgttagagcagtgt
ggagctcgtgttgttgattctctgcaaaaatttagtcagagtaaacagtccttgaagctg
attgtactgcagacagatggcgatcatgaaactgacaacatctggaaaaagcacaagaaa
gtgtgtgttgcccacgactggatcattgagtgcattggcatgtatgcgcgcatctgcatc
agcccctacatcataggaagcccaagccaaagccacattgtggcctccaacctgccgtat
gccctcatgcaggagacccaggagttgtag
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integrated database retrieval system
