Penaeus vannamei (Pacific white shrimp): 113806192
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Entry
113806192 CDS
T06111
Symbol
IntS4
Name
(RefSeq) integrator complex subunit 4
KO
K13141
integrator complex subunit 4
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113806192 (IntS4)
Spliceosome [BR:
pvm03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
113806192 (IntS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
INTS4_8HBD
HEAT
HEAT_2
PDS5
Adaptin_N
Vac14_Fab1_bd
Cnd1
MMS19_N
SCD
Cnd3
CEP104-like_TOG
DUF4042
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
113806192
NCBI-ProteinID:
XP_027213114
LinkDB
All DBs
Position
35:complement(28641912..28660438)
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AA seq
950 aa
AA seq
DB search
MAALLKKRALAEYCQTVVEEHPRPAKRLQLVRRARTVDHSEFSVALLDTAEPQNLLPILV
NLHHALPVSGETQTEVVQGLMTLLQNESHPPIIIVKVLALLAAVITTQSQAQPVFEEVMT
VAKRSKSQKVIAQAIHTASSLSQCVPPDPKLQDQVIQLALSQFTSTNYVIKVRSLEAVGN
LCPTEEGRVQSAIMKTLIEHTKHQDNRVRTAAFNALLVVQEREVKLSPEVYDSVCQALHD
DYQCVREVALNLIKVAADGDPERLVPIPDSDHHVRLVDHAFSQICNMVNDISVRVRTKAA
SLLGNMTSVSERFLAQTLDKKLMSNMRRKRSAHERARAMVASGEWSTGKRWSDDAPKEQV
EADSVSVINTGACGAFVHGLEDEFLEVRNATLDSICALALNNSQFANQSLDFLVDMFNDE
IEEVRLKAIQVLQQIACHITLRSDQLGEILHALKDSSLDIRESLHTFLATTILSTMDCIK
LCVTGLIDNLRRYPQDRRSIHRCLRRLGSNHPILVEALVPQLLLIHPYFDGVEPSVQDGE
YICKLILVLNAAVHCPTIVPLLEQHTLRHYAYLRDTMPQLVPVLKLGEDWQPTGEAVATN
TLRFLRESMEKVANLERSSTQMRLTIYQIVHSDLVKLADIDPELSPAAHFAALYTQCMWL
FNKILSTRNWLTPSSLSVQQSGALKSNVDQLLRNTFRLRHAFTNLSPQAEASIRNLRVRT
LALQLVYVVHGSTGSALGLCDNFLEHTEALHRYLTDEKLSGDSFLEAVFEELSQLEEPRP
GAVARILQPLLISHPVPALAPITNPREIRMCSAEILEPQPDSEVIYKLSAGLVVGVPLDA
EVSHIPNPSTLRIRVAYPDHSTHLVVPPKSHLRKVGPGTYRLLTTVLVSAQVSWSEACQV
GLSLVLDLSDQEVLAARRHSVAKADDSATTIQLVKPVKVLVWPKVIRKGV
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggcggctttattaaagaagagagcgcttgccgaatactgccagactgtagtggaagag
caccccagaccggcaaagagactacagctggtccgtcgtgcacgcacagttgaccacagt
gaattcagcgttgctttgctggacacggcagagccacagaacttgcttccaattctcgtc
aatctccaccatgcactacctgtttcaggtgagactcaaacggaagttgtacaaggactg
atgaccctgttgcagaatgagtcccatccgcccattattatcgtcaaggtcctggctctt
ttagcggctgttataaccacccagtctcaagcacagccagtgttcgaggaggtgatgact
gtggcaaagaggtccaagtcgcagaaggtcatagcccaggctattcacacagcgagctcc
ctttcacagtgtgttcctcctgaccctaagctgcaggatcaggtcattcagctcgccctc
tcacagttcacctccaccaattatgttattaaggtccgctctctggaggcagttggtaac
ctgtgcccaactgaggagggacgtgtgcaatcagcaataatgaagacgctgatagagcac
accaaacaccaggacaaccgtgttcggacggcagcttttaacgctttgctggttgttcag
gagagagaagtgaagctctcccctgaggtctatgacagtgtctgccaggcactgcacgat
gactaccaatgtgtgcgtgaagtggccctcaatttgattaaggttgcggcagatggtgac
ccagagcgcctggttcccatacctgacagtgaccaccacgtcaggctagtcgaccacgct
ttctctcagatatgcaacatggtgaatgacatcagcgtgagagtgcggaccaaagctgcc
tccctcctcggcaatatgaccagcgtgtctgagaggttccttgcacagacacttgacaag
aagctgatgtcaaatatgaggaggaaacgatcagctcatgaaagagcacgggccatggtg
gcatctggagaatggtcgactgggaagcgctggtcagatgacgcccccaaagagcaagtc
gaggcagactcagtctctgtcatcaatactggtgcctgcggtgctttcgtccacggcttg
gaagatgaatttcttgaggttcgtaatgcaaccctagactccatctgtgccttagctctc
aataactcgcagtttgccaaccagtctcttgacttccttgtcgacatgttcaatgacgaa
attgaggaagtccgactgaaagctatacaggtgctgcaacagatagcctgtcacatcaca
ctacggtcggatcaattgggagaaatcctgcatgcactgaaggactcttccctcgacatc
cgagagtctctccacacattcctggccactacgatcctctccaccatggactgcattaag
ctctgtgttactgggcttattgataacctaaggcgttatcctcaggaccgccgcagtatc
caccgctgccttcgtcgtttaggttccaaccaccccatccttgtggaggcactggtccca
cagttgttgttaattcatccttactttgatggcgtggagcccagcgtgcaggatggagag
tatatttgtaagctgattttagtcctgaatgctgctgtccactgcccaaccattgtgcca
ctcttggagcaacatacattgcgtcattacgcctacctcagagacaccatgccacagctc
gtacctgtgttgaagcttggtgaagactggcaaccaacaggtgaagctgtggccactaac
acactgcgattcctgcgtgagtctatggagaaggtagccaatttggagcgctcttcaacc
cagatgcggctcaccatttatcagattgtccactctgatttggtcaagctagctgacatt
gaccctgagctgtctccagctgcccattttgctgccctctatacccagtgcatgtggctt
ttcaacaagatactctctaccagaaattggctcacaccatcttctctatcagtgcaacag
agcggtgccttaaagagcaatgttgaccagctcttgaggaacaccttccgcttacgtcac
gctttcaccaacctgagccctcaagcagaggcaagcatcaggaacctccgggtgcgcaca
ctggcactgcagcttgtgtatgttgtacacggttccacggggtcggctcttggcctgtgc
gacaacttcctggaacatacagaagccttacatagatacctcacagatgagaaattaagt
ggcgactcatttttagaagctgtgtttgaggagctcagccagctggaggaacccaggcca
ggagctgtagcaaggatcttacagccattgctcatttctcaccctgttcctgcgctagcc
cctattacaaatcccagggagatccggatgtgttccgcagagatccttgagcctcagcca
gatagtgaggtcatctacaaactaagtgcaggactcgttgtaggggtgcccctggatgct
gaagtatcccacatcccaaacccatcaaccttacgtatccgtgtggcttatccagatcat
tccacgcatctcgttgtgccaccaaagagccacctgcggaaagttggtccagggacttac
cgtctcttgaccacagtgttggtgtcagcacaggtatcgtggtcagaagcctgccaagtg
ggactgtccttggtgttggacctgagtgaccaggaagtcttggcggccagaagacactcc
gttgccaaagcagatgactctgccactactatacaacttgttaagcctgtcaaagtgctt
gtttggcccaaggtgatcagaaagggtgtgtaa
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