Penaeus vannamei (Pacific white shrimp): 113812227
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Entry
113812227 CDS
T06111
Symbol
Nthl1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113812227 (Nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113812227 (Nthl1)
Enzymes [BR:
pvm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
113812227 (Nthl1)
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
113812227 (Nthl1)
Prokaryotic type
113812227 (Nthl1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-GeneID:
113812227
NCBI-ProteinID:
XP_027219884
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Position
28:24896908..24906573
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AA seq
398 aa
AA seq
DB search
MYQEEFFKNFWPNWSNYNPYAFSGQAIGATAGYSGWGTHGHPAHAHGGAMNDYRQMVEDP
MLPSYAMAPFSRRHISIQYEDQTRMVGQQKVEDCLMASQESSSDQYKPLPPGWEPPDWRE
VLENIRVMRSARDAPVDHMGIQKCMDDDAPPEVRRFQVLIALMLSSQTKDEVNHAAMTRL
RAHGLTIDNILATDDETLGQLIYPVGFWRKKVMYIKKTCKILKNEYGGDIPSTLEEMRKL
PGVGPKMSHLCMSLGWGKLSGICVDTHVHRITNRLGWTGETTKNPEKTRLALESWLPEEL
WAETNELLVGLGQKICLPVSPKCSQCLNVQLCPYGRNPVNRSPRKRSPPKHPVETGPPAQ
QLVSYYGMKPAQVFNTNSWSAFSSYDQRRTLTDCVVRT
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaagaagaattttttaagaatttctggccgaactggtcgaattacaacccctat
gcctttagtgggcaagccattggtgccactgctgggtacagcggatggggtactcatggc
caccctgcccatgctcacggtggggccatgaatgactaccgtcagatggtggaggatcca
atgttaccaagttatgctatggcaccgttttcaagaaggcacatcagtattcagtacgag
gaccagactagaatggttggtcagcaaaaggttgaagattgtctcatggccagccaggaa
agttcctctgatcagtataagcctctgcctccaggatgggagcctccagattggcgagag
gttttggaaaacatcagagtaatgagatcagctcgtgatgccccagtcgaccatatgggt
atccagaagtgcatggatgatgatgccccaccagaagtaagaaggttccaggtccttatc
gcattaatgttgagcagccagacaaaggatgaggtgaaccacgcagcgatgacgagacta
cgtgcacatggcctcacaattgacaacattctggccaccgatgatgagacgttgggccag
cttatctaccctgtaggattttggaggaagaaagttatgtacatcaagaagacttgcaag
atcttgaaaaatgagtacggtggagacataccatccacactggaggagatgcgcaagctg
ccaggtgttggacccaagatgtcgcacctctgtatgagcctcggctggggaaaactgtct
ggcatatgtgttgacactcatgttcatcgcatcaccaaccggttaggatggacaggggaa
actacaaaaaatccagagaagactcgtttagccttagaatcctggctacctgaggaactg
tgggcagagacaaatgagctgttggtgggactaggtcagaagatatgcctgcccgtcagc
ccgaagtgcagccagtgtctaaatgttcagttgtgtccctacggtagaaatcctgtcaac
agatcgcccagaaaacgttcaccgcccaagcaccctgtggaaactgggcctccagcacaa
cagcttgtatcttattatgggatgaaacctgcgcaggtcttcaacactaatagctggtct
gccttctcttcatatgaccaaagaaggacgctgactgattgtgttgtaagaacttga
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