Penaeus vannamei (Pacific white shrimp): 113812272
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Entry
113812272 CDS
T06111
Name
(RefSeq) DNA polymerase kappa
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
113812272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvm03400
]
113812272
Enzymes [BR:
pvm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113812272
DNA repair and recombination proteins [BR:
pvm03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
113812272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
IMS_HHH_1
IL12p40_C
Motif
Other DBs
NCBI-GeneID:
113812272
NCBI-ProteinID:
XP_027219934
LinkDB
All DBs
Position
13:complement(37973373..37987509)
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AA seq
788 aa
AA seq
DB search
MSKTDSDKENVDSAKMAEQTTKANRNDLPGSSSGPQNLALNTHKAGMEGLDTEKINEIIK
KASEGSRFYQHKQKCQQRLDAKIVEMKRAAEAFSEEQIKKATLQMDHLVKELESRRDLTH
TIVHVDMDMFYAAVEMRDDPSLRDKPMAVGSTGMLSTSNYAARKFGVRAAMPGFIGKKLC
PDLVIVRPDFTKYKQASKEIQEIFSQYDPNFCPMSLDEAYLDITEYLVKNAHVLEMEDED
CETPAERVVNEMRRKIQEKTKLTASAGIASNTRLAKVCSDMNKPNGQYYLPPEHQRILDF
ISSLPIRKVSGIGNVMEQQLSAIGVNICSDLMKKRGLLKLLFSDINYNNFLSIALGLGHT
TLSTWTEKDRKSISTETTFRGTADRNVLFTIIKDLCHELADEMAQKDIFGKVFTLKYKTV
DFQIRSRAHTFPDAVQTSEVMATTARRILQHEMDVSPQPLALRLIGVRMSNLLSSSEVGP
NRQSTLTQLFSNNNASCATKHCSDDKKSTHLQKNNGESQLSAQSSMSENANKKYMANQGL
KNASIGHYLSKAQNVKSPVKKFSYECPVCGDSVEVPSLVEFNKHVDICLVQGASVSVQSL
EDSKTLRHEHKEVSKSDTRDTDEPSNNENLKHTESSKETLLYTQGSSDSAHSNHCSSRGI
YTFSDYESDEELDFLEDNDNLSSDFGIPCDRQEDEEKNSGNAECKLKCPICEEQHFENIT
ALNEHVDECLSKSTINEILQQSTSQTSQLKPSNNQPSKSNCKRKGSSINKQAKKIKPVNN
TIERFFSS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaactgactctgacaaagaaaatgttgattcagctaaaatggccgagcagaca
acaaaggcaaacagaaatgatttgcctgggagttcctctgggcctcaaaacttggccctc
aacacgcacaaggcaggaatggaaggtttggacacagaaaagatcaatgaaattatcaag
aaggcatcagaaggttctcggttttaccaacacaagcaaaaatgccaacagcgccttgat
gctaagatagtggaaatgaagcgagctgctgaagccttctctgaggagcagattaagaag
gcaacgctacagatggatcaccttgtgaaggaattagagtccaggagagatctcacacac
acaattgtgcatgtggatatggatatgttctatgctgcagtggaaatgcgagatgatcca
tcgctaagggacaagccaatggcggttgggagcacaggaatgctctccacaagcaactac
gccgccaggaagttcggtgttcgagctgccatgccaggcttcattggcaaaaaattgtgt
cctgatcttgtgattgttagaccagatttcacaaaatacaaacaagccagcaaggagatc
caagagatattttcgcagtatgatcccaatttctgtcccatgtccttggatgaggcttat
ttggatataacggagtacttagttaagaatgcacatgtgcttgagatggaggatgaagat
tgtgagactccagcagaacgcgttgtaaatgagatgaggaggaaaatccaggaaaagaca
aagctaacagctagtgcaggcattgcatctaacacacgccttgctaaagtctgcagtgac
atgaataagcctaatgggcaatattacctgcctccagaacaccaacggattttggatttc
atatcctcactacccatacgtaaggtatctggcattgggaatgtgatggaacagcagttg
tctgctattggtgtgaatatttgttctgatctgatgaaaaagagaggacttctgaaattg
ctcttctctgatatcaattataacaactttctcagtattgctttgggattaggacacaca
accctcagcacctggacagaaaaagaccgcaagtccattagcacagagaccacctttcga
ggcactgcagatcgcaatgtgctcttcaccatcataaaagatctctgccatgaacttgct
gatgaaatggctcagaaagatatatttgggaaagtcttcactctcaagtacaagacagta
gactttcagattagaagtcgtgcgcacactttcccagatgctgttcaaacatctgaggta
atggcaactactgctcggagaatccttcagcatgagatggatgtatcaccacagccatta
gctttgcgacttataggcgtgaggatgtctaacctcctgagttcttctgaagttggacca
aaccgacagtcaacacttactcagttattttcaaacaacaatgccagttgtgccacaaag
cattgctctgatgacaagaagtccacacatttacaaaagaacaatggtgaaagccagctg
tctgctcaaagtagcatgtctgagaatgctaacaagaagtacatggcaaatcaaggtttg
aaaaatgcatccattgggcattatctctcaaaagctcaaaatgtaaaaagtccagtcaaa
aagtttagctatgaatgtccagtttgtggagattctgttgaagttccaagtcttgtggag
tttaataagcatgtagatatatgcttggtacaaggagcatcagtaagtgtccagtcactt
gaagattcaaaaactttaagacatgagcataaagaagtgtctaagagtgatacaagagat
acagatgaaccaagtaacaatgagaatttaaaacacactgagagttcaaaagaaacatta
ctatatacacagggcagttcagattctgctcattcaaatcattgtagttctagaggtata
tacactttctctgactatgaaagtgatgaagaattggattttcttgaagataatgataac
ctttccagtgactttggaataccatgtgataggcaagaagatgaagagaaaaattcaggt
aatgctgaatgcaagctcaaatgccccatctgtgaggaacagcactttgaaaacatcact
gctttgaatgaacatgtcgatgagtgtttaagcaagagcacaataaacgagatcttgcag
caaagtacatcacaaacaagccagttaaaaccaagcaataatcagccctcaaaatcaaac
tgcaagagaaaaggaagcagcataaataaacaagccaaaaagataaaacctgtaaataat
accattgaaagatttttttcttcttga
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