Penaeus vannamei (Pacific white shrimp): 113815118
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Entry
113815118 CDS
T06111
Name
(RefSeq) actin, muscle
KO
K05692
actin beta/gamma 1
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03082
ATP-dependent chromatin remodeling
pvm04145
Phagosome
pvm04814
Motor proteins
pvm04820
Cytoskeleton in muscle cells
pvm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113815118
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113815118
09142 Cell motility
04814 Motor proteins
113815118
04820 Cytoskeleton in muscle cells
113815118
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
113815118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvm03021
]
113815118
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113815118
03036 Chromosome and associated proteins [BR:
pvm03036
]
113815118
03029 Mitochondrial biogenesis [BR:
pvm03029
]
113815118
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvm04812
]
113815118
04147 Exosome [BR:
pvm04147
]
113815118
Transcription machinery [BR:
pvm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113815118
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
113815118
Chromosome and associated proteins [BR:
pvm03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
113815118
NuA4 complex
113815118
Chromatin remodeling factors
BAF complex
113815118
PBAF complex
113815118
GBAF(ncBAF) complex
113815118
SWR1 complex
113815118
Mitochondrial biogenesis [BR:
pvm03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Actin cytoskeleton organization
113815118
Cytoskeleton proteins [BR:
pvm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
113815118
Exosome [BR:
pvm04147
]
Exosomal proteins
Proteins found in most exosomes
113815118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
113815118
NCBI-ProteinID:
XP_027223009
LinkDB
All DBs
Position
38:9342916..9344868
Genome browser
AA seq
376 aa
AA seq
DB search
MCDDDVSPLVVDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQ
SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEESPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTAYLMKIMTERGYSFTTTAEREIVRDIKEKLCYVALDFESEMNVAAASSSLEKS
YELPDGQVITIGNERFRCPESLFQPSFLGMESVGIHETVYNSIMRCDIDIRKDLFANNVL
SGGTTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQSMWITK
EEYDESGPGIVHRKCF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgacgacgtaagcccccttgtggttgacaatggctccggcatggtcaaggcc
ggattcgccggagacgacgcccctcgcgccgtcttcccctccatcgtcggccgcccccgt
catcagggtgtgatggtcggtatgggtcagaaggacgcctacgtcggcgatgaggcccag
agcaagagaggtatcctgactctcaagtaccccatcgagcacggtatcatcaccaactgg
gacgacatggagaagatctggcatcactccttctacaacgaacttcgtgttgctcctgag
gaatctcccgtcctcctcactgaggctcccctcaaccccaaggccaaccgagagaagatg
acccagatcatgttcgagaccttcaacacacccgccatgtacgtggccatccaggccgtg
ctgtccctctacgcctctggtcgtaccactggtatcgtcctcgactctggtgacggtgtg
tcccacactgtccccatctacgaaggttatgctcttcctcatgctatccttcgtctcgac
ttggctggccgtgacctcaccgcttacctgatgaagatcatgactgagcgtggctactcc
ttcaccaccaccgctgaacgagaaatcgttcgtgacatcaaggagaagctttgctatgtc
gcccttgacttcgagagtgagatgaacgtcgctgctgcttcctcatccctcgagaagtcc
tatgaacttcccgacggtcaggtcatcaccattggcaacgagcgtttccgttgccccgag
tctcttttccagccttccttcctgggtatggaatctgttggtatccacgagaccgtgtac
aactccatcatgaggtgcgacattgatatcaggaaggacctgttcgccaacaatgtgctt
tctggtggtaccaccatgtaccctggtattgctgaccgcatgcagaaggaaatcacttca
ttagctccttccaccattaaaatcaagattattgctcctcccgagcgcaaatactccgtc
tggatcggtggttccatccttgcctctctgtccaccttccagtccatgtggatcaccaag
gaggaatacgacgaatccggccctggaatcgtccaccgcaagtgcttctaa
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