KEGG   Penaeus vannamei (Pacific white shrimp): 113815127
Entry
113815127         CDS       T06111                                 
Name
(RefSeq) actin, muscle
  KO
K05692  actin beta/gamma 1
Organism
pvm  Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03082  ATP-dependent chromatin remodeling
pvm04145  Phagosome
pvm04814  Motor proteins
pvm04820  Cytoskeleton in muscle cells
pvm05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:pvm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    113815127
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    113815127
  09142 Cell motility
   04814 Motor proteins
    113815127
   04820 Cytoskeleton in muscle cells
    113815127
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    113815127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvm03021]
    113815127
   03019 Messenger RNA biogenesis [BR:pvm03019]
    113815127
   03036 Chromosome and associated proteins [BR:pvm03036]
    113815127
   03029 Mitochondrial biogenesis [BR:pvm03029]
    113815127
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pvm04812]
    113815127
   04147 Exosome [BR:pvm04147]
    113815127
Transcription machinery [BR:pvm03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     113815127
Messenger RNA biogenesis [BR:pvm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     113815127
Chromosome and associated proteins [BR:pvm03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     113815127
    NuA4 complex
     113815127
  Chromatin remodeling factors
   BAF complex
    113815127
   PBAF complex
    113815127
   GBAF(ncBAF) complex
    113815127
   SWR1 complex
    113815127
Mitochondrial biogenesis [BR:pvm03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    113815127
Cytoskeleton proteins [BR:pvm04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     113815127
Exosome [BR:pvm04147]
 Exosomal proteins
  Proteins found in most exosomes
   113815127
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 113815127
NCBI-ProteinID: XP_027223022
LinkDB
Position
38:9465824..9468963
AA seq 376 aa
MCDDDTCALVVDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQ
SKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEESPVLLTEAPLNPKANREKM
TQIMFETFSTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD
LAGRDLTAYLMKIMTERGYSFTTTAEREIVRDIKEKLCYVALDFESEMNVAAASSSLEKS
YELPDGQVITIGNERFRAPEALFQPSFLGMESVGIHETVFNSIMRCDIDIRKDLFANTVM
SGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILSSLSTFQAMWITK
EEYDESGPGIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtgtgacgacgatacctgcgctcttgttgtggacaatggctccggcatggtcaaggcc
ggattcgccggagacgacgcccctcgtgccgtcttcccctccatcgtcggccgcccccgt
caccagggtgtgatggtcggtatgggtcagaaggacgcctacgtcggtgatgaggcccag
agcaagcgtggtatcctcaccctcaagtaccccatcgagcatggcatcatcaccaactgg
gacgacatggagaagatctggcatcactccttctacaacgaactccgtgttgctcctgag
gaatctcccgtcctcctcactgaggctcccctcaaccccaaggccaaccgcgagaagatg
acccagatcatgttcgagactttcagtactccggctatgtacgtggccatccaggccgtg
ctgtccctgtacgcctctggtcgtaccactggcatcgtcctcgactccggtgatggcgtc
tctcacaccgtccccatctacgaaggttatgctcttcctcatgctatccttcgtctcgac
ttggctggccgtgacctgactgcttacctgatgaagatcatgactgagcgtggctactcc
ttcaccaccaccgctgaacgtgaaatcgtccgtgacatcaaggagaagctttgctacgtc
gcccttgacttcgagagtgagatgaacgttgctgctgcttcctcatccctcgagaagtcg
tatgaacttcccgacggtcaggtcatcaccatcggcaacgagcgtttccgcgcacctgag
gcactattccagccttcattccttggaatggaatctgttggaatccacgaaactgtattc
aattccatcatgaggtgcgacattgatatcaggaaggacctgtttgccaacaccgtcatg
tctggaggcaccaccatgtaccctggtattgctgaccgcatgcagaaggaaatcactgcc
ttggctccttccaccatcaagatcaagatcattgcacctcccgagcgtaaatactccgtg
tggatcggcggttccatcctttcttccttgtccaccttccaggctatgtggatcaccaag
gaagaatacgatgagtccggccctggaatcgtccatcgcaagtgcttctaa

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