Penaeus vannamei (Pacific white shrimp): 113818542 Help Entry 113818542         CDS       T06111                                  Symbol Roc1a Name (RefSeq) RING-box protein 1A   KO K03868   E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32] Organism pvm  Penaeus vannamei (Pacific white shrimp) Pathway pvm03420   Nucleotide excision repair pvm04120   Ubiquitin mediated proteolysis pvm04141   Protein processing in endoplasmic reticulum pvm04310   Wnt signaling pathway pvm04350   TGF-beta signaling pathway Brite KEGG Orthology (KO) [BR:pvm00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     113818542 (Roc1a)    04120 Ubiquitin mediated proteolysis     113818542 (Roc1a)   09124 Replication and repair    03420 Nucleotide excision repair     113818542 (Roc1a)  09130 Environmental Information Processing   09132 Signal transduction    04310 Wnt signaling pathway     113818542 (Roc1a)    04350 TGF-beta signaling pathway     113818542 (Roc1a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:pvm04121]     113818542 (Roc1a)    03400 DNA repair and recombination proteins [BR:pvm03400]     113818542 (Roc1a) Enzymes [BR:pvm01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.32  cullin-RING-type E3 NEDD8 transferase      113818542 (Roc1a) Ubiquitin system [BR:pvm04121]  Ubiquitin ligases (E3)   UBL E3 ligases    113818542 (Roc1a)   Multi subunit type E3    SCF complex     Ring finger protein      113818542 (Roc1a)    Cul2 complex      113818542 (Roc1a)    Cul3 complex      113818542 (Roc1a)    Cul4 complex      113818542 (Roc1a)    Cul7 complex      113818542 (Roc1a)    Cul8 complex      113818542 (Roc1a)    Cul9 complex      113818542 (Roc1a) DNA repair and recombination proteins [BR:pvm03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      Cul4-DDB2 complex       113818542 (Roc1a)     TCR (transcription coupled repair) factors      Cul4-CSA complex       113818542 (Roc1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_16 Motif Other DBs NCBI-GeneID:  113818542 NCBI-ProteinID:  XP_027226532 LinkDB All DBs Position 28:complement(12660209..12671192) Genome browser AA seq 114 aa AA seqDB search MSAMEVDPLEDEVEVPSSSTSKGDKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCI ECQANQASVTSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH NT seq 345 nt NT seq  +upstreamnt  +downstreamnt atgtcagcgatggaagtggacccattggaagatgaagtcgaagtgccgtcttccagcact tcaaagggagacaagaagagattcgaagtgaaaaagtggaatgccgtggcactgtgggcc tgggatattgttgtggacaattgtgctatctgccgaaaccatattatggacttgtgcatt gagtgtcaagcaaaccaagcatctgttacttcagaggaatgcactgttgcttggggagtt tgcaatcatgctttccatttccattgcatttcccgatggttaaaaacacgtcaagtgtgt ccactagataacagggaatgggagttccagaagtatggccactga

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