Penaeus vannamei (Pacific white shrimp): 113824065
Help
Entry
113824065 CDS
T06111
Symbol
SmB
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B isoform X1
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113824065 (SmB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113824065 (SmB)
03041 Spliceosome [BR:
pvm03041
]
113824065 (SmB)
03032 DNA replication proteins [BR:
pvm03032
]
113824065 (SmB)
Messenger RNA biogenesis [BR:
pvm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
113824065 (SmB)
Spliceosome [BR:
pvm03041
]
Complex A
U1 snRNP components
Sm proteins
113824065 (SmB)
U2 snRNP components
113824065 (SmB)
Complex B
U1 snRNP components
113824065 (SmB)
U4/U6.U5 tri-snRNP components
113824065 (SmB)
Complex C
U2 snRNP components
113824065 (SmB)
DNA replication proteins [BR:
pvm03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
113824065 (SmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
UPF0425_C
Motif
Other DBs
NCBI-GeneID:
113824065
NCBI-ProteinID:
XP_027232610
LinkDB
All DBs
Position
21:complement(34798216..34813954)
Genome browser
AA seq
200 aa
AA seq
DB search
MEKESDTCYTFSKNNKMLSHIGYRMKVTMQDSRTFIGIFKAFDKHMNVILADCEEFRCVR
GKKNKEEKQEKRTMGLVLLRGETIVTMTLEGPPPSEDGPRVNLPGSAPGPGVGRPAGRGM
PGPGGAGLQGPVRGVGGPSQQMMQPAARAGPQLNMPPRGPPGGMPPHMMGGMPPHMGRGG
PMGPPSGPMMRGGPPAGRPY
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaaagtgacacctgctatacgttctccaagaacaacaagatgcttagccac
attggctaccgcatgaaggtaactatgcaagacagtaggaccttcatcggcatcttcaaa
gcctttgacaagcacatgaatgttatccttgccgactgtgaggaattccgctgtgtacgt
ggaaagaaaaacaaggaggagaagcaggagaagagaacgatgggcttggtactcttgcgt
ggtgagactatcgtaaccatgaccctggaaggaccccctccctccgaggatggccctcgt
gtcaatctccctggctctgcccccggcccaggcgttggccgcccagctggacgtggcatg
cctggtcccggaggtgcaggactgcaaggtcctgtacgcggtgtgggaggaccctcacaa
cagatgatgcagccagcagcgcgtgccggcccacagctcaacatgccccccagaggaccc
cctggtggcatgccccctcacatgatgggtgggatgcccccacacatgggtcgtggtggg
cccatgggacccccaagtggaccgatgatgagaggaggtccccccgcaggccgcccttac
taa
DBGET
integrated database retrieval system
