KEGG   Pteropus vampyrus (large flying fox): 105294518
Entry
105294518         CDS       T07815                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
pvp  Pteropus vampyrus (large flying fox)
Pathway
pvp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105294518 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvp03041]
    105294518 (SMNDC1)
Spliceosome [BR:pvp03041]
 Complex A
  U2 snRNP components
   U2 related factors
    105294518 (SMNDC1)
 Complex B
    105294518 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    105294518 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 105294518
NCBI-ProteinID: XP_011362058
UniProt: A0A6P3QB92
LinkDB
Position
Unknown
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLTS
SDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggacctagcaaaacagctggcaagctacaaagctcaactccagcaagttgaa
gctgcattatctggaaatggagaaaatgaagatttgctaaaattaaagaaagatttacaa
gaagttatagaactaaccaaagaccttctgtcaactcagccttccgaaactcttacaagt
tcagacagttttgcttctactcagcccactcattcatggaaagtaggagacaaatgtatg
gcagtctggagtgaagatggacagtgttacgaagcggagattgaggagatagatgaagaa
aacggcactgctgcaatcactttcgctggctatggcaatgctgaagtgactccactgttg
aacctcaaacctgtagaagaaggaaggaaggcaaaggaggacagtggcaataaacccatg
tcaaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagctttgaaaaaa
gcacaaagaataaaagaacttgagcaggagagagaggaccagaaggtgaaatggcagcag
ttcaacaacagagcctattctaaaaacaaaaaaggccaggtaaagaggagtatttttgct
tcacctgagagtgtaactggcaaagttggagtaggaacttgtggaattgccgataaacct
atgacacaatatcaagatacctctaaatacaatgtcaggcatttgatgcctcaataa

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