Pteropus vampyrus (large flying fox): 105301324
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Entry
105301324 CDS
T07815
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X2
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
pvp
Pteropus vampyrus (large flying fox)
Pathway
pvp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pvp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105301324 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvp03400
]
105301324 (LIG4)
Enzymes [BR:
pvp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
105301324 (LIG4)
DNA repair and recombination proteins [BR:
pvp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
105301324 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
ATG17_like
Motif
Other DBs
NCBI-GeneID:
105301324
NCBI-ProteinID:
XP_011372221
UniProt:
A0A6P3R0D2
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAASPTSQTVASHVPFADLCSTLERIQRSKGRAEKIRYFREFLDSWRKFHDALHKNQKNV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLSIQQVNDILDSVASNNSSKRKDLIKKSLLQFITQSSA
LEQKWLIRMIIKDLRLGFSEQTVFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKNQSFYIETKLDGERMQMHKDGDIYEYFSRNGYKYTE
QFGASPQEGSLTPFVHNAFKTDIQVCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRKRYEILTSIITPIPGRIEIVQKTQAHTKKEVIDALNE
AIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVSGLMDELDVIIVGGYWGKGSRGGMM
SHFLCAVTEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKYWKPFHKKAPPRSIVC
GTEKPEVYIEPCNSVIVQIKATEIVPSDMYKTGCTLRFPRIEKIREDKEWRECMTLDDLE
QLRGKASGKLASKHFYVGGDDEPQEKKRKAAPKTKKVIGIIEHLKAPNLSNVNKVSSIFE
DVEFCVMSGTESCPKLDLENRIAELGGYIVQNPGPDTYCIIAGSENIRVKNIISSNKHDV
VKPEWLLECFNTKSCVPWQPRFMIHMCPSTKKHFAREYDCYGDSYFIDTDLNQLKEVFSG
IKNSSEQTPKEMASVIADLEYRYSWECSPLSMFRHYAIYLDLYTVINDLSTEIEGTRLAF
TALELRFHGAKVVSCLAEGVSHVIVGEDHSRVVDFKAFRRTLKIKFKILQDGWVTDSIDK
CELQEEKQYLV
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcaccaacttcacaaactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagagaagtaaaggacgtgcagaaaaaattagatacttcagg
gaatttttagattcttggagaaaatttcatgatgcccttcataagaaccaaaaaaatgtc
acagactctttttacccagcaatgagacttattcttcctcagctagaaagagagagaatg
gcctatggaatcaaagaaactatgcttgctaagctttatattgaattgctcaatttacct
agagaaggaaaagatgctcttaaacttttaaattacagaacacctactggaactcgtgga
gatgctggagactttgccatgattgcatactttgtattgaaaccaagatgtttacagaaa
ggaagtttaagcatacagcaagtaaatgacattttagactcagttgccagcaataattct
tccaaaagaaaagacctaataaagaagagtcttcttcagtttataactcagagttcagca
cttgaacaaaagtggcttatacggatgataataaaggacttaagacttggttttagtgag
caaactgtattttctgtttttcataatgatgctgctgagttgcataatgtcaccacagat
ctggaaaaagtctgtagacaactgcatgatccttcagtaggactcagtgatatttctatc
actttattctctgcctttaaaccaatgctagctgcaatagcagatattgaacgaattgag
aaggacatgaaaaaccagagtttctacatcgaaaccaagctagatggtgagcgaatgcaa
atgcataaagatggggatatatacgaatacttctcccgaaatggatataaatatacagaa
cagtttggtgcttctccacaggaaggttcccttacaccatttgttcataacgcattcaaa
acagatatacaagtctgtatccttgatggtgagatgatggcctataatcctaatacacag
acttttatgcaaaaggggaataagtttgatatcaaaagaatggttgaagattctgatctg
caaacttgttactgtgtttttgatgtattgatggtcaataataaaaagctaggacatgag
accctgagaaagaggtatgaaattcttactagtattattacaccaataccaggtagaata
gaaatagtacagaaaacacaggctcatactaagaaagaagtaattgatgctctgaatgaa
gcaatagataagagagaagagggaatcatggtaaaacatcctctatccatttataagccg
gacaaaagaggtgaaggatggttaaaaattaaaccagagtatgtaagtggactgatggat
gaactggatgtcataattgtcgggggctattggggtaaaggttcacggggtggaatgatg
tctcattttttgtgtgctgtaacagagaagcctccttctggtgaaaaaccatcagtgttt
catactctctgtcgtgttggctcaggttacaccatgaaagaactgtatgatctgggcttg
aaattagccaaatattggaagccttttcataaaaaagctccaccacgtagcattgtatgt
ggaacagagaagccggaagtgtacattgaaccttgtaattctgtcattgttcagattaaa
gcgacagagattgttcccagtgatatgtataaaactggctgtactttgcgttttcctcga
attgaaaagataagagaagacaaagagtggcgtgaatgtatgactctggatgacttagaa
caacttcgagggaaagcatctggaaagcttgcatctaaacacttttacgtaggtggcgat
gatgaaccacaagaaaaaaagcggaaagctgccccaaagactaagaaagttattggaata
atcgaacatttaaaagcacctaacctttctaatgtaaacaaagtttccagtatatttgaa
gatgtagagttttgtgttatgagtggaactgagagctgtccaaagcttgatctggagaac
agaattgcagaacttggtggttatatagtacaaaacccaggcccagacacatactgtatt
attgcagggtctgagaacattagagtgaaaaacataatttcttcaaataaacatgatgtt
gtcaagcctgagtggctgttagaatgttttaacaccaaaagctgtgtgccatggcagcct
cgctttatgatccatatgtgcccatcaacaaaaaaacattttgcccgtgaatatgattgt
tatggtgatagttattttattgatacagatttgaatcaactgaaggaagtattctcagga
attaaaaattctagtgaacagactcctaaagaaatggcttctgtgattgctgatttagaa
tatcgatattcctgggagtgctctcccctcagtatgtttcgacactacgccatttattta
gacttgtatactgttattaatgacctgagtaccgaaattgagggaacaagattagctttt
acagccttagagcttcgatttcatggagcaaaagttgtttcttgtttagctgagggagtg
tctcatgtaatcgttggggaggatcatagtcgtgttgtagattttaaagctttccgaaga
actcttaagataaagtttaaaattctgcaagacggttgggtaactgattcaatagacaaa
tgtgagttacaggaggaaaaacaatatttggtttaa
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