Candidatus Planktophila versatilis: A1sIA79_02610
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Entry
A1sIA79_02610 CDS
T05250
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pvs
Candidatus Planktophila versatilis
Pathway
pvs00300
Lysine biosynthesis
pvs00550
Peptidoglycan biosynthesis
pvs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
A1sIA79_02610
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A1sIA79_02610
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pvs01011
]
A1sIA79_02610
Enzymes [BR:
pvs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
A1sIA79_02610
Peptidoglycan biosynthesis and degradation proteins [BR:
pvs01011
]
Precursor biosynthesis
Amino acid ligase
A1sIA79_02610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
L27
Motif
Other DBs
NCBI-ProteinID:
ASY17128
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Position
509953..511452
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AA seq
499 aa
AA seq
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MIRPLTNFSLNLSEVAQLVSAENTEAIKKLAAGIEITGVVHSDSEVEAGDIFLAIPGTKV
HGASFIAAAVARGAVAVVTDLAGAALTSALPTLVVKDVRSAGAMIASSLYKDPTRDLATI
GITGTNGKTTVSTLLYQLFAGAGRESGLIGTIETRIGSEVLKSVRTTPEAPELQALSAVM
RERHMRSIVMEVSSHALSMNRVKASHFAIVGFTNLSQDHLDFHKDMESYFAAKAKLFTYE
YADLGFINIDNEYGARLAAQCEIPVVTLSRSNSAAQWHFTAIHTIASGAEISIRGNGGIL
IESKTSLLGGYNLDNLLMAVAIAHESGIDPVEIAALIPALTGAPGRVEPISLGQNFTALV
DYAHSPDAVEKVLAAAREFTTGKVIAVLGCGGDRDATKRPLMGQALASGSDVAIFTSDNP
RSESAAEILRQMTAKVDINEASKIIEDRLAAISYAVNLASVGDTVLILGKGHEVGQEVAG
VITPFDDRLTLAQAIEAKK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcccgcttacaaatttctccctcaacctatctgaggtggcgcaacttgtaagc
gctgaaaataccgaggcaatcaagaaattagctgcaggtattgaaatcacaggtgtagtg
cactctgattccgaagttgaagctggagatatcttcttagcaattccaggaacaaaggtg
catggggcaagcttcatcgcagcagctgttgctcggggagcagttgcagttgttactgat
ctagctggcgcagccctcacaagcgccctacctaccttggtagtaaaagatgttcgcagc
gctggcgccatgattgcctcatctttatataaagatcccactcgggacttagccactatc
ggcatcaccggcaccaacggcaagaccaccgtatctaccttgctctatcaactctttgca
ggtgccgggcgcgagagcggacttatcggcactatcgaaaccaggattggatctgaggtt
ctcaaaagtgtgagaactacgccggaggcacctgaattacaggcgctatctgcggtgatg
cgggagcgacatatgcgatcgatagtgatggaggtttctagccacgcactatccatgaat
cgtgtgaaagcttctcactttgcaatcgttggttttactaatctctcgcaagatcatctt
gattttcataaggatatggaatcttatttcgcagctaaggcaaagctatttacttacgag
tatgccgatcttggttttatcaatattgataatgagtatggtgcaagactggcggcgcag
tgcgaaatcccagttgtcacactttcgcgaagcaatagcgctgcccaatggcacttcact
gcgattcacaccattgcatcaggggctgagatcagtatcagaggtaacggcggaattctg
attgagagtaaaacttccttactcggtgggtataacttagataatcttctgatggcagtt
gccatcgcacacgaatctggaattgatcctgttgaaatcgctgcactgattcctgctctt
accggagcccccggcagagtggaacctatttcgctaggtcagaatttcaccgcactggtg
gattatgcgcactcacctgatgccgttgagaaagtacttgcagcagcgcgcgaattcaca
actgggaaagtgattgcagtattaggttgtggtggagatcgagatgccaccaagcgccct
ctgatgggacaggcacttgccagcggtagtgatgtggcaatctttactagcgataatcca
cgtagtgagagtgcagcagagatcttgcgccagatgactgcgaaggtggacattaatgaa
gcatcaaagattattgaagatcgcttagctgctatttcctatgcggtgaacctggcctct
gttggggatactgtcttgattctgggtaaaggtcacgaagtgggccaggaagtcgctggc
gttattactccatttgatgatcgactcacgctggcgcaagcgattgaggcaaaaaaatga
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