Pogona vitticeps (central bearded dragon): 110081365
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Entry
110081365 CDS
T05000
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110081365 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvt03041
]
110081365 (EFTUD2)
Spliceosome [BR:
pvt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110081365 (EFTUD2)
Complex C
U5 SnRNP specific factors
110081365 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
110081365
NCBI-ProteinID:
XP_020653653
UniProt:
A0A6J0U1A0
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDEMGRESKDLDELDDDEDDDEMGDHDDDHPGMDVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFASSQYSICFTLGSFAKIYADMYGDINYQEFAKRLWGDIYFNLKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKTLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatacagacctatatgatgagtttgggaattacatcggcccagaacttgattctgat
gacgacgacgatgaaatgggtcgggaatcaaaggatcttgatgagcttgatgatgatgaa
gatgatgatgagatgggagatcatgatgatgaccaccctgggatggatgtggtgctacat
gaagataagaaatactatccaacagccgaggaggtgtatggtccagaggtagagaccata
gtacaggaggaagacactcagcctctgacagaacctattataaaaccagtgaaaaccaag
aaattttctcttatggagcaaacattgccagtcactgtgtatgagatggacttccttgca
gacctgatggacaattctgagctgatccggaacgttacactctgtggacacttgcaccat
ggcaagacctgctttgtggattgtttgattgaacagactcaccctgaaatcaggaagcgg
tatgaccaggatctttgctatacagatatactcttcactgaacaagagagaggtgttgga
atcaagagcacaccagtgaccattgttctccctgacaccaagggcaaatcatttcttttc
aatatcatggacacacctggtcatgtaaacttctccgatgaggtcacagcaggtcttcgc
atttccgatggcgtggtgctcttcattgatgctgcagagggggtgatgcttaacaccgag
aggttgatcaagcatgcagtgcaagagagactggcagtgactgtgtgtattaacaaaatt
gaccgcctgatcctggaactgaagcttcctcctactgatgcctattacaaactgcggcac
attgtagatgaagtgaacggcttaatcagcatgtattccacagatgagaacctcatcctc
tctccactcctgggcaatgtttgtttcgccagctcgcaatacagcatctgtttcactttg
ggttcttttgccaagatttatgctgatatgtatggagatatcaattaccaggagtttgcc
aaacggctctggggagacatctatttcaacctcaaaacgagaaagttcactaagaaagcc
ccaaccagcagttcccagcggagtttcgtggagtttatccttgagcctctttacaagata
ctggctcaggtggttggtgatgttgacaccactctgccccggacactggatgagttggga
atccacctaactaaagaagagctgaaacttaatatccgtccccttttgaggcttgtctgc
aaaaagttttttggagaattcacaggctttgttgatatgtgtgtgcagcatatcccctcc
ccaaaagtgggagcaaaaaccaagattgagcacacctatacaggtggagtggactcggac
ctgggggaagccatgagtgaatgtgaccctgatggcccgctcatgtgtcacaccacgaag
atgtacagtacggatgatggggtccagttccatgcttttggtagggtgttaagtgggacc
atccatgcggggcagcctgttaaggtccttggagaaaactacaccctggaagatgaggag
gattcacagatttgcactgtgggacgtctctggatctctgtagcaaggtatcacatagag
gtcaacagggttcctgctggcaactgggtgctcattgaaggtgtggaccagcctattgtg
aagacagccaccataaccgagcccaggggcaatgaagaggctcagatcttccgacctttg
aagttcaataccacgtctgttatcaaaattgcagtggagcccgtaaatccctctgagtta
cccaaaatgctggatggtctgcggaaggtcaacaagagctacccgtccttaaccaccaag
gtggaagaatctggtgaacacgtgatcttgggcacaggcgagctctatcttgattgtgta
atgcatgatctccggaaaatgtattcagagattgatatcaaggttgctgatcccgttgtc
accttctgtgaaacagttgtggaaacatcttccttgaaatgttttgcggagacacccaat
aagaagaataagatcacaatgattgctgagcctctggagaaaggtctggctgaagacatt
gagaatgaagtggtacaaataacatggaacagaaaaaagctgggcgagtttttccaaacc
aagtatgactgggatttgttggctgcccgttctatctgggcttttgggccagatgctact
ggaccaaatatcttggtggatgacaccctgccttcagaggttgataaaacccttttgggt
tctgtgaaggacagtattgtgcaaggtttccagtggggaaccagagaaggaccgctatgt
gatgagttgatccgcaatgtgaaattcaagatcctggatgctgtcattgcccaggaacca
ttgcatcgtggaggtgggcaaatcatcccaacagctcggcgggtggtgtattctgccttt
ctcatggccacaccacgattaatggaaccatattattttgtggaagtccaggcccctgcg
gattgtgtctctgcagtatacacagtcctggccaggcgaaggggccatgtgacccaagat
gcacccatcccaggctctcctctctatacaatcaaagccttcatcccagctattgactca
tttggatttgagacagacctcaggacacatacccaggggcaagcattttcactctccgtc
tttcaccactggcaaattgtgccaggtgaccccttggacaaaagtattgtgatccgacct
cttgagccccagccagccccccatctggccagagagtttatgatcaagacccggcgcagg
aagggactaagtgaggacgtgagcatcagcaagttcttcgatgaccctatgttgctggag
ttggcaaaacaggatgtggtgctgaactaccccatgtga
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