Pogona vitticeps (central bearded dragon): 110084246
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Entry
110084246 CDS
T05000
Symbol
SMG6
Name
(RefSeq) LOW QUALITY PROTEIN: telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
pvt
Pogona vitticeps (central bearded dragon)
Pathway
pvt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110084246 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvt03019
]
110084246 (SMG6)
03032 DNA replication proteins [BR:
pvt03032
]
110084246 (SMG6)
Messenger RNA biogenesis [BR:
pvt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
110084246 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
110084246 (SMG6)
DNA replication proteins [BR:
pvt03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
110084246 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
110084246
NCBI-ProteinID:
XP_020659111
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MLADPEPPKGRAILLTRAPEQARARGVCFVWDDLLPPGGVFSIETTKGPRHRKDHRRPDL
EIYKPGLSRLRNKPPVPKPEGPGQEEEAAQGGMAGDQNSPPALPPREEPGLSQDLQRGNG
PHPNGIPEGNAEVGAPHSQAGTLEDGGPQVTRRAKKPDQQIYQAGKRLQGSSKEPTAEEP
PVKNETSKETEKEAGKGGEGPTRKPAVQEAKEGSLNTEGTHSVRGEKGRRAEKPEGFRKG
SEEAPLGGTKRHADSVRGEKGRRAEKPEGSRKGSEEALLGGTKAGTPKRYSRSDKRRNRY
RTCSTSSAGSNNSVEGARGEGEAGKKRQEAPKERLRLRQPPPQQQQQQQRLSGSSTDSLE
DDRVERGLARNSEAKRCLEQDWLSRAGSRQEEKGAQPGSRGLSAAKGDWRKRTPSGTSLS
DSAEPGEGKPQGRGRGILVLPANTDLTASGAGGSPEAPLAGGPRLLFGTGGSKGARARGR
GGTVRRLWDPNNPEQKPALKSPMAQLHFLDTDDEAVATPVPRGGDPRQVPASYYRFQNSD
NPYYYGRAVGQGPPYPYPGYSLPYPVGVSNGVYPGPYYPPTGSSGYPSPAEPYLCSPLVA
SPLCPEMEPPVRSLQQPELSQVLREASNLEQQLSNLLSRDRLSPEGLEKMGQLRGEMLQL
YERCLLADIEFADAQNVDQLLWKNAFYQVIEKFRQLLKDPLGENAQELRSKLFQVLDEGT
LFFDGLLQKLQLTYQFKLEDYMDGTAVRSKPLQKMVKYALISAQRSLICQGDICRYREQG
SDTANYGKARSWYLKAQQIAPKNGRPYNQLALLAVYTRRKLDAVYYYMRSLAASNPILTA
KESLTSLFEETKRKAEQKKSPIRAANQGKKSAFRPSGDDATRLELWLPPSPPPSGQGHES
GRDSEQDGGLGGLSPSDLNKRFVLSFLHAHGKLFTRIGMETFSAVAAEVLSEFRALLAHS
PSPVGSPRMLQLMAINMFAVYNSXXTECLSEDCRSVIQEQATALGLAMFSLLVKRCTSLL
RDVALAATQGPDGASEDDGIKVSSLPADLRELLPSVKVWSDWMLGHSDTWNPPPSALELP
PSVSVDVWATLADFCNILTAVNQSEVPLYKDPDEDLVLLSLEEDRLLSGFVPLLVAPQEP
CYVEESSDKVIAADCKRITVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDAMGKEAPRQ
EGKQREDQEEDVRIEAFEDDSEAEGSGTELDIKELRARKQALTRKVAEQQRRQDKIQAVL
KDQARVRQMELEIRPVFLVPDTNGFIDHLAGLAKLLDCRQFILVVPLIVINELDGLARGP
DSEHRVGGYARLLQERARKAVEFLESRFERRDSYLRALTSRGNELESISFRREDLSRQQG
NNDDLILSCCLHYCNDKAKDFMPANKDDPIRLLREVVLLTDDRNLRVKALTRNVPVRDIP
TFLKWAQEG
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgctggctgacccagaacccccaaagggacgggccattctcttgactcgggctcccgag
caggccagggcacgcggagtctgcttcgtttgggatgatctcctccccccgggaggtgtg
ttctccattgagaccacaaaggggccaaggcatcggaaagaccacaggcgcccagacctt
gagatctacaagcctggcctctcccgcctgcggaacaagccgccggtcccaaagccggag
gggcccgggcaggaggaggaggcggcccagggcgggatggcgggtgaccagaactctcct
cctgctctgcccccccgggaagagcctggcctctcccaggacctgcagagaggcaacggc
ccgcatccaaatggcatcccagaaggaaacgctgaggtgggggctccccacagccaggca
ggcaccctggaagacgggggtcctcaggtcaccaggcgagccaagaagcccgaccagcag
atctaccaggctgggaaacgactgcaaggctcttccaaggagccaacagctgaggagccc
cccgtgaagaatgagactagcaaggagacagaaaaagaggccgggaaggggggtgagggc
cccaccaggaagccggcggtccaggaggcaaaggaagggagcctcaacacagaaggcacc
cactccgtccgaggggagaagggtcggcgagccgagaaaccagaggggttcagaaagggt
agcgaggaggcccccttgggcggcaccaagaggcacgccgactccgtccgaggggagaag
ggtcgtcgagccgagaaaccagaggggtccagaaagggtagcgaggaggccctcctgggc
ggcaccaaggcgggcacgccgaagcggtactcccgctcagacaagcgccggaaccgctac
cggacctgtagcaccagttcggccgggagcaacaacagcgtggagggggcgcggggggaa
ggagaggcgggcaagaagcggcaagaagcccctaaggagcggcttcgccttcggcagcca
cccccgcaacagcagcaacagcaacagcgcctctctggatcctccacagactctctggag
gacgaccgggtggagcgtgggctcgccaggaactcggaggcaaagaggtgcctggagcag
gactggctttcccgggcgggcagccggcaagaggagaaaggcgcccagccaggcagcagg
ggcctctcggccgccaagggggactggcggaagcgcacgccctctggcaccagcttgagc
gattctgcagaacccggagaggggaagccccagggccgaggccgcggcatcttggtcctc
ccggccaacacggacctcacagccagcggtgctggcggctccccagaagctcctctcgcc
gggggtcccagactcctctttgggacagggggcagcaaaggggcccgggccaggggccga
ggagggaccgtccgccgcctctgggaccccaacaaccccgagcagaagccggcgctgaag
agccccatggcgcagctgcacttccttgacacggacgacgaggcggtggcgactcctgtc
ccccggggaggcgacccccgccaagtgccggcctcatactaccgcttccagaactccgac
aacccttactactatggccgggcggtgggccaggggcccccctacccttacccgggatac
tccttgccttatccggtgggggtcagcaacggggtctacccggggccttactatcccccc
accggcagcagcggctacccaagccccgccgaaccctatctctgcagtcctctcgtggca
agccctctgtgccccgagatggagccgccggtccgcagcctccagcagccggagctgagc
caagtcctccgggaggccagcaacctggagcagcagctgagcaacctcctgtccagagac
cggctgagtcctgaggggctggagaagatggggcagctcaggggcgagatgctgcagctg
tacgagcgctgcctcctggccgacatcgagtttgccgacgcccagaacgtggaccagctg
ctctggaagaatgccttctaccaggtgattgagaagttccggcagctgctcaaggacccc
ctcggggagaacgcccaggagctccgcagcaagctcttccaggtcctggacgagggcacc
cttttctttgacggcttgctccagaagctgcagctcacctaccagttcaagctggaggac
tacatggatggcacggccgttcgcagcaaacccctgcagaagatggtcaagtacgccctg
atcagcgcccagcggagtttgatctgccagggagacatctgccggtaccgggagcaaggg
agcgacaccgccaactatgggaaagcccgcagctggtacctgaaggcccagcagatcgcc
cccaaaaacggacgcccctacaaccagctggccctcctggctgtctacacgaggagaaag
ctggacgccgtctactactacatgcggagcttggctgccagcaaccccatcctgaccgcc
aaggagagcctcacgagtctctttgaggagacgaagcggaaggctgagcagaagaagagc
cccatccgggcagccaaccaggggaagaagtcggccttccggccctcgggcgacgacgcc
acccgtctggagctctggctccccccctcccccccgccctccggccagggccacgagtca
ggccgcgactcggagcaggacggcggcctcgggggcctgagccccagcgatctgaacaaa
aggtttgtcctgagttttctccatgcccatgggaagctgtttacccggattgggatggag
acgttctctgctgtggccgccgaggtcctgagcgagtttcgggcgctgctggcgcacagc
ccctccccggtcgggagcccccgcatgctgcagctcatggccatcaacatgtttgctgtc
tataactccnnnnccacagagtgcctgtcggaggactgccgttcggtgatccaggaacag
gccacggccctggggctcgccatgttctccctcctggtcaagcgctgcaccagcctgctg
cgggacgtcgccctggcagccactcagggcccggacggtgcctctgaagacgacggcatt
aaagtctcttccctgcctgcagacctgagggagcttctgcccagcgtcaaggtctggtcg
gactggatgctcggacactcggacacctggaaccccccgcctagtgccttggagctgccc
ccatcggtctccgtggacgtgtgggccacgctggccgacttctgcaacatcctgacggcg
gtgaaccagtcggaggtgcccctgtacaaggacccggacgaggacctggtcttgctgagc
ctggaggaggaccgcctgctctccggcttcgtcccgctgttggtagcccctcaggagccc
tgctacgtggaggaatcctcggacaaggttattgcggccgactgcaaacggatcacggtg
ctgaagtatttcctggaagccctctgtggccaagaggagcccttgctggcattcaagggt
ggaaagtatgtgtccgtggcccccgtcccagacgccatgggaaaggaagcgccgcgccaa
gaggggaaacaacgggaagatcaggaggaggacgtccggatcgaggcctttgaggacgac
tccgaggctgaagggagcggcacagagctggacatcaaggaactgagggcccggaagcag
gcactgacccggaaggtggccgagcagcagcgccgacaggacaagatccaggcggtgctg
aaagaccaggcccgggtgcggcagatggagctggagatccggcccgtcttcctggtcccg
gacaccaacggcttcatcgaccacctggccggcctggccaaactgctggactgccgtcag
ttcatcctggtggtgcccctgatcgtgatcaacgagctggacggcctggccagaggcccc
gattcagagcaccgggtcgggggctacgcacgcctcttgcaggagcgggcccgcaaagcc
gtggagttcctggagtcccgctttgagcgccgggacagctacctgcgggccctgaccagc
cggggcaacgagctggagtccatctccttccgcagggaggacctttccaggcagcagggg
aacaacgacgacctgattctctcttgctgcctccattactgcaacgacaaggccaaggac
ttcatgccagccaacaaagacgacccgatccgcctgctccgggaggtggtgctgctgacg
gacgaccggaacctccgggtgaaggccctgacgcgcaacgtccccgtgagggacatcccc
accttcctgaagtgggcgcaagagggctga
DBGET
integrated database retrieval system
