Phaseolus vulgaris (common bean): 137807624
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Entry
137807624 CDS
T03093
Name
(RefSeq) 110 kDa U5 small nuclear ribonucleoprotein component CLO
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137807624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvu03041
]
137807624
Spliceosome [BR:
pvu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
137807624
Complex C
U5 SnRNP specific factors
137807624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFL1
EFG_III
MMR_HSR1
EF-G_D2
Roc
Motif
Other DBs
NCBI-GeneID:
137807624
NCBI-ProteinID:
XP_068464450
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All DBs
Position
3:complement(39630119..39635146)
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AA seq
986 aa
AA seq
DB search
MDDSLYDEFGNYIGPEMESDQDSDRDSDPEADDNADGKSDGGAASDGEDPSNGWMTTISE
DMENQVVLAEDKKYYPTAEEVYGDDVETLVMDEDEQPLEQPIIKPVRNIKFEVGVKDSST
YVSSQFLLGLMSNPTLVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFDPQSEKHTRYTDT
RIDEQERKISIKAIPMSLVLEDSNSKSYLCNIMDAPGHVNFSDEMTAALRLADGAVLIVD
AAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPKDAYHKLRHTLEVINTHIS
AASSIAGDVQVVDPVAGNVCFASGTAGWSFTLQSFAKLYGKLHGIPLEASKFASRLWGDY
YFHPDTRAFKKKPPATGGERSFVEFVLEPLYKIYSQVIGEHKKSVETTLAELGVTLSNAA
YRLNVRPLLRLACSSVFGQASGFTDMLVQHIPSPRDAAITKVDHIYTGPKDSSIYKAMAQ
CDADGPLMVNVTKLYPKSDCSVFDAFGRVYSGKIQTGQTVRVLGEGYSPDDEEDMTVKEV
TKLWVYQARDRMPVAEAPPGSWVLIEGVDASIMKTATLCNVDYDEDVYIFRPLQFNTLSV
VKTATEPLNPSELPKMVEGLRKISKSYPLAVTKVEESGEHTILGTGELYLDSIMKDLREL
YSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMITEPLERGLAEDIENGVVST
DWNRKKLGEFFQTKYDWDLLAARSIWAFGPDKQGPNILLDDTLPTEVDKNLLNAVKDSIV
QGFQWGAREGPLCDEPIRNVKFKIVDARIAPEPLHRGSGQIIPTARRVAYSAFLMATPRL
MEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFGFETDL
RYHTQGQAFCMSVFDHWAIVPGDPLDKNIVLRPLEPAPIQHLAREFMVKTRRRKGMSEDV
SINKFFDEAMMVELAQQAADLHQQMM
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagcttgtacgacgagtttggcaactacatcggcccggaaatggagtccgac
caggactctgaccgcgactccgaccccgaagccgacgacaacgccgacgggaagtccgac
ggcggcgctgcgtcggacggcgaggatccgagcaacggatggatgacgacgatctcggag
gacatggagaatcaggtggttctggcggaagacaagaagtactacccaaccgcggaggag
gtctacggcgacgacgtggaaaccctagtcatggacgaggacgagcagcccctggagcaa
cctatcattaagcccgtgaggaacatcaagttcgaggttggagtgaaggactcctccacc
tatgtctcctctcagttcctcctcggtctcatgtcgaaccctacgcttgtgcgcaacgtg
gcgctggtggggcacttgcagcacgggaagaccgtgttcatggacatgctcgtggagcag
acgcatcacatgtccacgttcgatccccagagcgagaagcacacgcgatatacagacact
cggattgatgagcaggagaggaagatttcgatcaaggctattcccatgtcacttgtgctg
gaggatagcaactccaagtcgtatctgtgtaacatcatggacgcgcctggccatgttaac
ttctccgatgaaatgaccgccgctttgaggcttgctgatggcgctgtcttgattgtagat
gctgctgaaggagtcatggtaaacacggaaagggcgatacgtcatgcaattcaggagcgg
ttgccgattgtagttgtaatcaataaggttgacaggcttataactgaacttaagttgccg
ccgaaggatgcttatcataaactaaggcatactttggaggttattaatactcacatatct
gctgcctcctcgattgctggtgatgttcaagttgtggatccggttgctggaaatgtttgt
tttgctagtggtactgctggatggtcctttacgttgcagtcatttgctaagttgtatggg
aagctgcatggaattcctttggaagctagtaaatttgcttctcgactgtggggagactat
tattttcatccagatactagagccttcaaaaagaagccccctgccactggaggggagcga
tcttttgtagagtttgtgctggagcctctttacaagatatacagccaagtgatcggggaa
cataaaaagagtgtagagacaacacttgctgaactaggagtcacactaagtaatgcagcc
tacagattaaatgtcagacccttgctaaggttggcatgcagctcagtttttggtcaagct
tcaggtttcactgatatgcttgttcaacatataccttcccctagggatgctgcaattacg
aaagttgaccatatatatactggtccgaaagactcgtccatttacaaagccatggcacag
tgtgatgctgatggccccctaatggttaatgtgaccaaattgtatccaaaatctgattgc
agtgtgtttgatgcctttggtagagtttatagtggcaagatacagacaggacagactgta
cgtgttctaggagaaggatactcaccagatgatgaggaggatatgacagttaaagaagta
actaagttgtgggtgtatcaagctcgagataggatgccagtagctgaggctcctcctggt
tcttgggtcctaattgaaggtgtggatgcttcaatcatgaaaactgccactctttgtaat
gtggattatgatgaagatgtgtatatattccggcctcttcagttcaatacactgtcagtg
gtaaaaactgctactgaaccattaaatccaagtgaattgccaaaaatggtggagggcctg
cgaaaaataagcaaaagttatcctcttgcagttactaaagtagaggaatctggtgagcac
actatattagggactggtgagctgtacttggattcaattatgaaggacctgagagagctc
tattctgaagtagaagtcaaggttgcagatcctgttgtctcattttgtgaaactgtcgtg
gaatcttcatcaatgaaatgctttgctgaaacaccgaacaagaagaataaaataactatg
attactgaaccattagaaagaggccttgcagaggatatagagaatggtgttgttagcact
gactggaatagaaaaaaactaggtgaatttttccagacaaaatatgattgggatcttctt
gctgcacggtcaatatgggcatttggccctgataagcagggccccaatattctgttagac
gatactcttccaactgaagttgacaagaatctgctgaatgctgtgaaggattccattgtt
cagggatttcagtggggtgcacgagaaggacctctgtgtgatgagcccatcagaaacgtt
aagttcaagattgttgatgcaaggattgcccctgaaccacttcaccggggatctggccag
atcattcccacagctcggcgagtggcctattcagccttcctcatggctactccgaggctt
atggaacctgtatattatgtggagattcaaacaccaattgattgtgtatctgcaatctac
actgtattatctagaaggcgtggacatgttactgctgatgttcctcagcccggcacccca
gcctatatcgttaaggcatttttgcccgtgatagaatcttttggatttgagacagacttg
agataccatacacaaggtcaagcgttttgcatgtcagtttttgatcattgggctattgtt
cctggagatcctctagacaaaaacattgttttgcgcccacttgaaccagcacctatccag
catcttgctcgtgagtttatggtgaagacaaggcggagaaaggggatgagcgaggatgta
agcataaataagttctttgatgaggctatgatggtggaattggctcagcaggcagcagac
cttcatcaacaaatgatgtga
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