KEGG   Phaseolus vulgaris (common bean): 137811382
Entry
137811382         CDS       T03093                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1 isoform X1
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    137811382
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvu03021]
    137811382
Enzymes [BR:pvu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     137811382
Transcription machinery [BR:pvu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     137811382
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 RNA_pol_Rpb1_7
Other DBs
NCBI-GeneID: 137811382
NCBI-ProteinID: XP_068469188
LinkDB
Position
2:complement(30751745..30764019)
AA seq 1473 aa
MDDEFFYGNKAPSGVIRAIKFDVLTENDIEKVSVLEINAAGQVTGSTLGLPNTSDECATC
GSKNKKICEGHFGVIKFPFPILHPYFMSEIAQILNKICPVCKSIRHKSKGAQLIFGIKRS
INCKYCSGNGVGRYPAMKFKFSSNDLYRRTAIIVEVNDKASKKSLGRSLPADYWDFLPYD
AQQEENYVNRRVLSPGQVTSLLNDVDPNFIEKYVPRNNLITLNCFPVTPNCHRVTEVPYA
ISNGNRLSFDDRTRSCKKLVDFRGTANELSSRVLDCLRISKLNPDKTPISIFADIQKKKV
AENACNSSGLRWIKDVILGKRNDSTFRTVVVGDPSLELSEIGIPCHIAESLQVSEYVNRQ
NLEKLLYCCELRLLEKGQINVCRKGSSIHLFKKEDLQIGDQFYRPLCDGDKVLINRPPSI
HQHSMIALTVRVLPISSVVCINPLCCSPLRGDFDGDCLHGYIPQSVSARVELSELVALDK
QLFNGQSGRNLLSLSEDSLTAAYLLMEDGVLLDVYQMQQLQMLCNKGLAPPAIVKSPSSN
SSFWSGKQLFSMLLPSDFDYSFPSDGVVVSDGELVSSFEASGWLRDSDCNVFQGLVEHFQ
GKSLNFLFAAQNVLCEWLSMTGFSVSLSDLYLSSDSYARKNMIEEICYGLQDAEKACNFK
QLLLDCYCDFLSGNHEESENSMTVDADSLNYERQISAALSQASVDAFRHVFRNIQSLADK
YACTDNTFLAMNKAGSKSSLVRLAQHSMCLGMQNSLVRLSYRLPRHLSCAAWNSQKGLDS
IQIYSGTLESVQSYIPCAVVKSSFLTGLNPLECFVHSVTIRASGFSENADVPGTLTRRLM
FFMRDLFAAYDGTVRNLYGNQLIQFSYDIDENTSCDKSFKEYAIGGEPVGALSASAVSEA
GYSALDQPVSLLEASPLLNLKNVLECGSRKKNGDQSVSLFFSEKVGKQRHGFEYAALEVK
NYLERLLFSKIVSTVMIIFTPPDSSSLEKYSPWVCHFHLDKEILMRRKLKVHSIIDYLYQ
RYYSQSTEPKVGFTKLKISSNRKCSVDSTAKEGEDICIDKEDSDDCITVTIVENSENPIQ
LNSVRDLMIPFFLGTTIKGFMDIKKVDILWNNQSKGTNSYNGSSGELYLRVTVASSGNTG
RFWGVLVNHCHKIMQIIDWPRSHPDNINYLSSAYGIDVAWQYYYKSLASAISDTGKSILP
KHLRLLANSMSASGEFVGLNAKGMAQQRQHASVSSPFVQACFSNPGRSFIKAAKSELTDN
LQGSLDALAWGNCPSMGTSGLFDIIYSEKGHEVDKAVDVYKLLEASFDKPNNKIGFHAHN
NSSGKCGSEFRHKNGYAFKEGKQWKNILRNFVTVNDIQKLTTASRCILNKYEIDELLSEF
DRSTILRVLNFHPRRSEKLGIGPQDIKVGWHPKFKDSRCFHIVRTDGTVEDFSYRKCILR
ALEVVDPKMSKIQKKKWSARDDAQVQCVTKDIE
NT seq 4422 nt   +upstreamnt  +downstreamnt
atggatgatgagtttttttacggaaacaaagcgccatctggtgtcataagagcgataaag
tttgatgtcttaactgaaaatgatatagagaaagtctctgttttggagataaatgcagcc
gggcaggtcactgggtctactttgggacttccaaatacatctgacgagtgtgccacttgt
ggttctaaaaacaaaaagatttgtgaaggtcattttggagtaatcaaatttccttttccc
atactccatccatattttatgtcagagattgcacaaatcttgaataagatttgccctgtt
tgtaaatctattcgtcataaatctaagggtgctcaattaatctttggaataaagcggtct
atcaattgcaaatattgttctggaaatggggtgggccgttatccagcaatgaagtttaaa
ttttcgtccaatgatctctacagaagaactgcaattattgttgaagtgaatgataaggcc
tcaaagaaaagtttgggacgaagcctgccagctgattattgggattttttaccttatgat
gctcaacaagaagaaaattatgtaaatagaagagttttatcgccaggacaggttacttct
ttgttgaatgatgttgatccgaacttcattgaaaaatatgttccaagaaataatttgatt
actcttaattgcttcccagtgactccaaattgtcatcgtgtaacagaagtcccttatgca
atttcgaatggaaaccgattgagttttgatgacaggactcgatcttgtaagaaattggtt
gatttcaggggcacagctaatgagttaagttctcgtgttttggattgcctgagaatttct
aagctaaatcctgataaaacacctattagtatttttgctgatattcaaaaaaaaaaagtt
gcagaaaatgcttgcaattcttctggtttaagatggataaaagatgtgattcttggaaaa
cgcaatgatagtacgttccgcactgtggttgttggtgatccatcccttgagctcagtgaa
attggtataccttgtcatattgctgaaagtttgcaggtttctgagtatgttaacaggcag
aatttggaaaagctgctttattgttgtgagctacgcctgttagagaagggacagataaat
gtttgcagaaaaggtagttcaattcatctgtttaaaaaggaagatctacagataggagac
caattttataggcctctttgtgatggggataaagttctgataaataggcccccttccata
catcaacattctatgattgctctcactgttagggtccttccaatatcttctgtagtgtgt
attaatccactctgttgttctccacttcgtggggattttgatggtgattgccttcatggg
tatattccacaatcagttagtgcaagagttgagcttagtgagcttgttgctttggataag
caattgtttaatgggcaaagtggtagaaatctgctttcactttccgaggatagtttaact
gctgcatatttgctaatggaagatggggtccttttagatgtttaccagatgcagcagctt
caaatgctttgtaacaaaggtttagctcctcctgcaattgtaaaatctccttcaagtaac
agctcattttggagtggcaagcaattgtttagcatgctcttgccttctgattttgactat
tcatttccttcagatggtgttgttgtcagtgatggggagcttgtatcttcttttgaggct
tctggatggttacgtgattctgactgcaatgttttccagggtcttgtggagcattttcaa
gggaaatctctaaactttttgtttgctgcgcagaatgttttgtgtgaatggttatctatg
actggttttagtgtttcactctcagatttgtacctctcttctgattcctatgcacgaaaa
aacatgattgaggaaatctgttatggcttacaagatgcagagaaggcgtgtaatttcaag
cagttattgttggattgttattgtgattttttgtctggaaatcatgaagagagtgaaaat
tctatgactgttgatgcagatagtctgaattatgaaagacaaatatctgctgctctcagt
caggcatcagttgatgcttttaggcatgtttttcgcaatattcaaagtttagctgacaaa
tatgcatgtacagacaatacttttcttgccatgaataaggctggaagcaagagtagttta
gtgagattagcgcaacattccatgtgccttggcatgcaaaattctctggtacgtttatct
tacagactgccccgccatctttcatgtgctgcttggaatagtcaaaaggggcttgattca
atccagatatattctggtacccttgaatctgttcagtcttacattccatgtgccgtggtc
aaaagctcatttctaactgggttaaatccacttgaatgttttgttcattctgtaacaatc
cgagctagtggttttagtgaaaatgcagacgttccaggaacattaacacggagactaatg
ttcttcatgcgtgatttgttcgctgcatatgacggaacagtgagaaatttatatggtaat
caacttattcagttttcttatgatattgacgagaacacttcatgtgataaaagtttcaaa
gagtatgctattggtggtgaaccagttggggcactttctgcttctgcagtttcagaagct
ggatacagtgctctggatcaaccagttagtctacttgaagcgtcacctttgctgaatttg
aaaaatgttcttgagtgtggttcaaggaaaaaaaatggtgaccagtccgtgtctttattt
ttttctgaaaaagttggtaaacagagacatgggtttgaatatgcagctttagaagttaag
aattatttggaaagattgctgttctcaaaaattgtttctactgtgatgataatattcacc
ccacctgatagcagcagcctagagaaatacagtccttgggtctgccactttcatttagac
aaggaaattctaatgagaagaaagttgaaagtgcattctatcattgactatctttaccag
agatattactcccagagtacagagccaaaagtcggttttaccaaattgaaaatatcaagc
aacagaaagtgttctgttgattccacggctaaggaaggtgaagacatttgtatagacaaa
gaagacagtgacgattgcattacggtcacaatcgttgaaaattctgagaatcctatacaa
ctgaattctgttcgggacttgatgatacctttttttctaggaacaacaataaaaggattt
atggacatcaagaaggttgatattctctggaataatcaatcaaaaggaacaaattcctat
aatggttcttctggtgaactgtacttgagggttactgtggccagctcgggcaacactgga
agattctggggtgtacttgtaaatcattgtcacaagataatgcagataattgactggcca
cggagtcatccagacaacataaattatctctcatcagcctatggaattgatgtagcgtgg
caatattattacaagagtttggcatcagcaatatctgatactggaaagtccatccttcct
aagcatctgcgtcttcttgccaatagtatgtcagctagtggagagtttgtgggattaaat
gctaaaggcatggctcagcaacgacaacatgcgtccgtttcatcaccatttgtgcaagca
tgcttttctaatcctggtaggagctttataaaagctgccaagtctgaactcacggataat
ctccagggcagcctggatgcattggcttggggaaactgtccctctatggggacaagtgga
ctgtttgatatcatatattcagagaagggacatgaggtagacaaggctgtagatgtatat
aagctgctagaagccagttttgacaagcccaacaataagattggtttccatgctcacaac
aattcatctggcaaatgtggttccgagtttaggcataaaaatggttatgcctttaaagag
ggaaaacagtggaagaacattctaagaaattttgtgacggtaaatgatattcagaagctg
actactgcttcaaggtgcatattgaacaagtatgaaattgatgagttgctaagtgagttt
gacagatcaacaattctaagagttttgaattttcatcctcgtagaagtgagaagttaggt
attggaccacaggacattaaggttggatggcatcctaaatttaaggatagccgctgcttc
catatagtacgaactgatggaactgttgaagatttttcataccgcaaatgcattcttcgt
gctcttgaggtagttgatccaaaaatgtcaaagatccagaagaaaaaatggtcagcacgt
gatgacgcacaagtccagtgcgtgaccaaggatattgagtga

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