Phaseolus vulgaris (common bean): 137826366
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Entry
137826366 CDS
T03093
Name
(RefSeq) transcription factor PIF4-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
137826366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvu03000
]
137826366
Transcription factors [BR:
pvu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
137826366
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
TerS_N
Motif
Other DBs
NCBI-GeneID:
137826366
NCBI-ProteinID:
XP_068488404
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Position
8:54108257..54114075
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AA seq
549 aa
AA seq
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MNNTIPGWDFESDTCLTNQRKPTGLDQEHVELLWQNGQVVMHSQQNRRLLGNSSNMRQVQ
KTAQSTLRASGPYENSNNLDQEEAAPWIQYPLDDPLEQEFCSNLLSELPPPCEVESYYMP
IRQLEEEKFANIFSPSGPHHPPSPSQPLPSNMKSSCVQGLQENPMPASGFHVADSSQKIN
DFGASRKVLNFPHFSAHVSSTSQKPRAKLSQSEGREPSVITVGSSHCGSNHIPQDQDVNW
VSSSGVWTTTNNITLSSEPEAVDCIQRPIPRSERGKSEMIEPTVTSSSGGSGSTGIGRTC
SLSTRDHGQKRKVTEEEAVEEQSEATELKSADGNKLSQRTRPSRKNRAAEVHNLSERRRR
DRINEKMRALQQLIPNSNKTDKASMLEEAIEYLKSLQFQLQVMCMGAGMTPVMFPGIQHY
MSQMGMGIGGPSLPSIHNPMQLPHAQPMSLTHPQMPNQNLMCQNPVLGAFNYQNQMQNPC
LSEQYARYMGYHLLHSASQSMNNVLRYGSQAMQHSETMIAGGNNSSGPMSGTANVDDAVS
GKTGSSTFN
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacactattccaggttgggattttgagagtgatacatgtctcaccaaccagaga
aagcccacagggctggaccaagaacacgtagaactcctatggcaaaatgggcaagtagtt
atgcacagccaacaaaataggaggctacttgggaattcatccaacatgagacaggtgcag
aaaactgctcaatcgacattaagggccagtgggccgtatgagaattcaaacaacttggat
caagaagaggcagccccatggatccaataccctcttgatgaccctttagaacaagaattt
tgttcaaaccttttatctgagctaccaccaccttgtgaagttgaatcttattacatgcca
atcaggcaattggaagaggaaaagtttgccaatattttctcccctagtggcccccatcat
cctccttcaccttcacaaccactaccatctaacatgaaatcctcctgtgttcagggactc
caagagaatcctatgcctgcttcaggatttcatgttgctgattcatctcagaaaatcaat
gactttggtgcatcacggaaggtgctaaattttcctcacttttcagcacatgtttcttca
acatctcaaaaacctagagctaagctctcacaaagtgagggtagagagccctcagtgatc
acggttggttcaagtcactgtggcagcaatcacatccctcaggaccaagatgtaaactgg
gtttcaagcagtggcgtttggaccaccactaataatatcactttatcttccgagcctgaa
gctgtagattgtatccagagaccaattcctaggagtgagagaggaaaatcagagatgatt
gaaccaactgtgacttcatcttccggtggctcaggcagtactggtattggaagaacttgt
tccctatcaacaagagaccatggccaaaagagaaaagtgacagaagaagaagcagtagag
gagcaaagtgaggccacagaacttaaatcagcagatggaaacaagttatctcagcggaca
aggccttccagaaagaaccgtgcagctgaagtgcataatctatccgaaaggagaagaaga
gataggatcaacgagaagatgagagcattgcagcaacttatacctaacagtaacaagaca
gacaaagcatcaatgttagaagaggcaatcgaatacttgaaatcacttcagtttcagctg
caggtaatgtgcatgggggctggcatgacaccagttatgtttccaggaattcagcactat
atgtcacagatgggaatgggaataggtggaccttctttgccttccattcacaacccaatg
caattaccacatgctcaacccatgtctctcactcaccctcagatgccaaaccagaatcta
atgtgccaaaatccagttttgggtgccttcaattaccaaaatcagatgcaaaacccatgc
ctttcagaacaatacgcacgttacatgggttaccatctcctgcatagtgcctctcagtca
atgaataatgtattgagatatggttcccaagcaatgcaacatagtgaaacaatgattgca
ggaggcaataatagcagcggacccatgagtggaacagctaatgttgatgatgctgttagt
ggcaaaactggttcttccacctttaactga
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