Phaseolus vulgaris (common bean): 137830104
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Entry
137830104 CDS
T03093
Name
(RefSeq) ABC transporter I family member 20
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137830104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137830104
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
137830104
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
AAA_29
Arf
AAA_23
AAA
ORC-CDC6-like
Zeta_toxin
AAA_30
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
137830104
NCBI-ProteinID:
XP_068493341
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Position
7:32617617..32621387
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AA seq
333 aa
AA seq
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MAGNGTHSDSKAATIVIKDLKFTYPGIDGHPPPGSLPLIQNFSLTLCSGDRCLLVGSNGA
GKTTILKILGGKHLVEPDMVRVLGRSAFHDTTLVSSGDLCYLGGEWRRDVAFAGFEVPIQ
MDVSAEKMIFGVAGIDPQRREELIKVLDVDLSWRLHKVSDGQRRRVQICMGLLKPFKVLL
LDEITVDLDVLARADLLRFLRKECEEKGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAM
PMDKVKEISKLSLMRTVESWLRKERDEDRKKRKERKAAGLPEFGKQVEGSRVTGDPARAA
VRASNNGWAAGRLSSTVAGQENFILSSNRVLRQ
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggccggtaatgggactcattcagattcaaaagctgcaacaattgtcattaaagatctc
aaatttacataccccggcatcgacggccacccgccgccgggttccttgccgcttattcaa
aacttttctctcactctctgttccggcgaccgctgccttcttgtcggttccaacggcgct
gggaaaaccacgatcctgaagatactaggagggaagcacctggtggaacctgacatggtt
cgcgtgcttggaagatcagcttttcacgacaccactttggtgtcttctggtgatctctgt
tatctcggtggcgagtggaggcgagatgttgcttttgcgggttttgaggtgccaatacag
atggacgtttctgctgaaaaaatgatatttggtgtggctgggattgatcctcaaagaaga
gaggaactcatcaaggtattggatgttgatctttcctggagattgcataaagtatctgat
ggtcaaagaagaagagtacagatttgtatgggtctcctcaaaccgttcaaggttcttctt
cttgatgagataactgtcgatcttgatgttctagcaagagctgaccttctgagatttctc
agaaaggaatgtgaagagaagggtgccaccattatctatgcaacacatatatttgacggt
cttgaggattggcctacaaatattgtttatgtagcccatggaaagctgcaattagcaatg
cctatggacaaagtcaaagaaattagcaaattgtcgctaatgagaacagtagaaagttgg
ctgcggaaggaacgagatgaagatagaaagaaaagaaaagagagaaaagcagctggtctt
cctgaatttggaaagcaagttgagggaagccgtgtaacaggggatcctgcacgtgctgct
gttcgagcatctaataatggctgggctgcaggacgattaagttccaccgttgcaggccag
gaaaactttatcctcagctctaatcgagtactgaggcagtag
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