Phaseolus vulgaris (common bean): 137835542
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Entry
137835542 CDS
T03093
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03420
Nucleotide excision repair
pvu04120
Ubiquitin mediated proteolysis
pvu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137835542
04120 Ubiquitin mediated proteolysis
137835542
09124 Replication and repair
03420 Nucleotide excision repair
137835542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvu04121
]
137835542
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137835542
Enzymes [BR:
pvu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
137835542
Ubiquitin system [BR:
pvu04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
137835542
Multi subunit type E3
SCF complex
Ring finger protein
137835542
Cul2 complex
137835542
Cul3 complex
137835542
Cul4 complex
137835542
Cul7 complex
137835542
Cul8 complex
137835542
Cul9 complex
137835542
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
137835542
TCR (transcription coupled repair) factors
Cul4-CSA complex
137835542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
137835542
NCBI-ProteinID:
XP_068500192
LinkDB
All DBs
Position
5:complement(34490585..34493765)
Genome browser
AA seq
118 aa
AA seq
DB search
MATLDSDVTMVPAGEPSSSTGPSCSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctggattccgacgtgacgatggttccggccggcgaaccctccagcagcacc
ggtccttcttgttccagcaagaagcccaagcgattcgagatcaagaagtggaatgccgtt
gctctatgggcttgggatatcgttgtggacaattgtgctatctgcaggaaccatatcatg
gatctctgtattgagtgccaggccaaccaggctagcgccactagcgaggaatgcactgta
gcttggggagtttgtaaccatgcttttcacttccattgcataagccgatggctgaagacc
cgtcaagtatgtccgctagataatagcgagtgggagtttcagaaatatggtcactag
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integrated database retrieval system