Phaseolus vulgaris (common bean): 137835554
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Entry
137835554 CDS
T03093
Name
(RefSeq) DNA repair protein RAD16
KO
K15083
DNA repair protein RAD16
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvu03400
]
137835554
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
137835554
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
zf-RING_UBOX
zf-RING_5
ResIII
zf-C3HC4_2
zf-C2HC_2
zf-C3HC4_3
zf-RING_2
zf-ANAPC11
zf-C3HC4_4
RING_XB3-XBAT31
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
137835554
NCBI-ProteinID:
XP_068500214
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All DBs
Position
5:34817402..34824563
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AA seq
927 aa
AA seq
DB search
MELRSRRRLSNTTAVSATLNSSGNEQQPKDDAVEEDETKGQCSNNKDKGVSVMYSDSDMV
SGSDSGSDYEDEELDGSYLPDLNAYVYPLSSGSVSGGEDSDSDSSDGDKASSKKVTVSRE
RRKSINTAKGEPSDVVKVEDHEYSMIPPVLVPSSFKGTKKRKYTRKGTKGDSRPVLLWNA
WEEEQEKWIDQHILEDVDLDNQSEVMNETAEAPSDLTMPLLRYQREWLAWALKQEHSLSR
GGILADEMGMGKTIQAIALVLAKREFQDICEPDQSIPCSSSLSAIKGTLVICPVVAVTQW
VSEIDRFTLKGSTKVLVYHGANRGRSGDRFADYDFVITTYSVVENEYRKHMMPPKERCPY
CGKLFLPSKLMYHQNYFCGPDAVRTEKQSKQAKKKREVTKGKTKECDSRKILKGSIKEKG
DKMGIDMEDSDAVPVRSDKSFLHAVKWQRIILDEAHYIKSRHCNTAKAVLALDSTYKWAL
SGTPLQNRVGELYSLIRFLQITPYSYYLCKDCDCRILDHSSKECSVCTHSSVRHFCWWNK
YVATPIQSFGNGDSGKRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRKDCLDIK
EQDYYESLYNESQAQFNTYIEANTLMHNYAHIFDLLTRLRQAVDHPYLVVYSQSSSSRSA
VMANNATTVEQICGICHEPIEDLVVTSCEHSFCRACLIDYYSTSLGQVSCPACSKLLTVD
LTPNKDVGDQAKTTIKGFRSSSILNRIHLENFQTSTKTEALREEIRFMVERDGSAKGIVF
SQFTSFLDLINYSLHKSGVSCVQLNGSMSLTARDAAIRRFTEDPDCKIFLMSLKAGGVAL
NLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKEL
VFEGTIGGSSDALGKLTEADLRFLFVT
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcgttctcgtcgacgcctttccaataccacagcagtttctgctactctcaat
tcgtcagggaatgagcagcaacctaaggatgatgctgttgaggaagatgaaactaagggc
cagtgcagcaacaataaagacaaaggtgtatctgttatgtattctgattcggatatggtt
tctggttctgattccggttccgattatgaagatgaagaattggatgggagctacctgccg
gacttgaatgcatatgtatatccactttcaagcggcagtgtttctggtggagaagattct
gattctgattcatctgatggtgacaaagcttcatccaaaaaggtgacggtgtccagagag
agaagaaagagtatcaacacagcaaaaggggaaccgagtgatgtggttaaggtggaggat
catgagtattcaatgattccaccagtattggttccatcttcttttaagggaactaagaag
aggaaatatacaagaaaaggaactaaaggagattctcgtccagtgttgttgtggaatgca
tgggaagaagagcaagagaaatggattgatcagcatatattagaagatgttgacttagat
aatcagagtgaagtaatgaatgaaactgctgaggcgccctctgatctgactatgccttta
ctaagataccagagggaatggttagcttgggctttgaaacaagaacattctttgagtaga
ggtggaatacttgcagatgaaatgggaatggggaagactattcaagcaattgctcttgtc
cttgccaaacgtgaattccaagacatttgtgaaccagatcaatccataccatgttcatct
agcctgtctgcaattaaaggaacacttgtcatatgtcctgtggttgctgttactcagtgg
gtcagtgagattgatcgctttactttaaaaggaagcaccaaggtgctggtttatcatggg
gctaatagagggaggagtggggatcggtttgcagattatgattttgtgataactacatac
tctgttgttgagaatgagtacaggaagcatatgatgcctcctaaagagagatgcccatat
tgtggaaaattatttttgccgagtaagttgatgtatcatcaaaactatttttgtggacct
gatgctgttagaacagaaaaacaatcaaagcaagctaagaagaaaagagaagttactaaa
gggaagaccaaggaatgcgacagtagaaagattttgaagggttctatcaaggaaaaggga
gacaaaatgggcatagatatggaagattctgatgctgtacctgtgcgtagcgataagtca
tttctccatgctgtgaaatggcaaaggatcatattggatgaggcacactatatcaaatct
agacactgtaacactgctaaagcagttcttgctttagattctacctacaaatgggcgttg
agtgggactccccttcagaaccgagttggggagctgtattctctgataagattcctgcag
ataactccttattcttattacttgtgcaaggactgtgactgcaggattcttgatcacagc
tctaaagaatgttcagtctgcactcacagttctgtgcgacatttctgttggtggaataaa
tacgttgccacaccaattcaatcttttggaaatggtgattctgggaaaagagctatgata
ttgcttaaacataaagttttgaagaacatcgtactaaggcgcacaaaaataggcagggct
gctgatcttgcacttccacctagaattgtttctttgagaaaggattgcctggatattaaa
gagcaagactattatgaatcgttatacaatgaaagtcaggcacaatttaatacatacatt
gaagcaaatactctgatgcataattatgctcatatatttgacctcctcacacggctgcgt
caggctgttgatcatccatacctggtggtatattctcaaagttctagttcaagaagtgca
gttatggccaataacgctactactgttgagcaaatttgtggtatttgccatgagcctata
gaagaccttgttgttacctcctgtgagcattcattttgccgggcatgcttgatagactac
tactctacttccttgggccaagtatcatgccctgcgtgctctaaattacttacagttgat
ttaacacccaacaaggatgtcggagatcaggctaaaacaacaattaagggtttcagatcc
tcaagcattttgaatagaattcaccttgagaactttcagacgagcactaaaacagaggct
ttgagagaagaaataagattcatggtcgaaagggatggttctgccaaagggattgttttt
agccaattcacatcattcttggatcttataaactactctttacacaagtctggagtatct
tgtgttcagttgaatggaagcatgtcattgactgctagggatgctgccattcggagattc
actgaagatccagattgcaaaatttttctcatgagcttgaaggctgggggtgttgcactc
aatttgacggtagcttcacatgtcttccttatggacccttggtggaacccggccgtagag
cgccaggctcaagacagaattcaccgaatagggcaatataaacctataagaattgtgagg
tttgtcatcgagaacacaatcgaggagagaattctgaaactccaagagaagaaagaactc
gtgtttgaagggactataggtgggtcttctgatgctctggggaaattaacagaggcagac
ttgagatttttgtttgtcacctaa
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