Phaseolus vulgaris (common bean): 137837354
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Entry
137837354 CDS
T03093
Name
(RefSeq) sm-like protein LSM3A
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03018
RNA degradation
pvu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137837354
09123 Folding, sorting and degradation
03018 RNA degradation
137837354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvu03019
]
137837354
03041 Spliceosome [BR:
pvu03041
]
137837354
Messenger RNA biogenesis [BR:
pvu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137837354
mRNA degradation factors
5'-3' decay
Lsm complex
137837354
Spliceosome [BR:
pvu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
137837354
Complex C
U2 snRNP components
137837354
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
137837354
NCBI-ProteinID:
XP_068502436
LinkDB
All DBs
Position
4:15292598..15295519
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AA seq
97 aa
AA seq
DB search
MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVE
IDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atggctacagaggaagagagtgcggtgaaggagcctttggatctcattaggctcagcctt
gatgaacgtatctacgtcaagctccgttctgacagagagcttcgtggcaaacttcacgct
tatgatcagcatcttaatatgattcttggtgatgttgaagaggttgttactactgtggaa
attgatgatgagacatatgaagaaattgtgaggactactaagcggacggttcctttcttg
tttgttaggggagatggggtgatattggtttccccgcccttgaggaccgcataa
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