KEGG   Phaseolus vulgaris (common bean): 137837354
Entry
137837354         CDS       T03093                                 
Name
(RefSeq) sm-like protein LSM3A
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03018  RNA degradation
pvu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137837354
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137837354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvu03019]
    137837354
   03041 Spliceosome [BR:pvu03041]
    137837354
Messenger RNA biogenesis [BR:pvu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     137837354
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     137837354
Spliceosome [BR:pvu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    137837354
 Complex C
  U2 snRNP components
    137837354
SSDB
Motif
Pfam: LSM TIG_SUH Glutaredoxin
Other DBs
NCBI-GeneID: 137837354
NCBI-ProteinID: XP_068502436
LinkDB
Position
4:15292598..15295519
AA seq 97 aa
MATEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVE
IDDETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA
NT seq 294 nt   +upstreamnt  +downstreamnt
atggctacagaggaagagagtgcggtgaaggagcctttggatctcattaggctcagcctt
gatgaacgtatctacgtcaagctccgttctgacagagagcttcgtggcaaacttcacgct
tatgatcagcatcttaatatgattcttggtgatgttgaagaggttgttactactgtggaa
attgatgatgagacatatgaagaaattgtgaggactactaagcggacggttcctttcttg
tttgttaggggagatggggtgatattggtttccccgcccttgaggaccgcataa

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