KEGG   Patella vulgata (common limpet): 126808639
Entry
126808639         CDS       T09576                                 
Name
(RefSeq) TNF receptor-associated factor 2
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
pvul  Patella vulgata (common limpet)
Pathway
pvul04137  Mitophagy - animal
pvul04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pvul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    126808639
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    126808639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvul03019]
    126808639
   04121 Ubiquitin system [BR:pvul04121]
    126808639
Enzymes [BR:pvul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     126808639
Messenger RNA biogenesis [BR:pvul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     126808639
Ubiquitin system [BR:pvul04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    126808639
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF TRAF3_RING TRAF_BIRC3_bd TRAF2_zf zf_C2HC_14 zf_UBZ zf-C3HC4_4 TRAFD1-XIAF1_ZnF zf-C3HC4 PRP21_like_P DUF2076 zf-RING_UBOX
Other DBs
NCBI-GeneID: 126808639
NCBI-ProteinID: XP_050389494
EnsemblRapid: ENSPVUG00005020292
LinkDB
Position
1:complement(12250499..12262819)
AA seq 561 aa
MAASKAPQPSPEGYNLEIFINKKPDEKFLCNKCELILREPVQSPCGHRYCQSCFKAICGH
TDSQITCQACVKEDTVDLDISYLHKDKMYPDMAIKREMGKIQCKCVNQGCSWTGVFKNYM
THEIDCEFRGITCKACGKNIPESKMEDHLKTSCPKRKVRCENCNAEILFSDIKEHKKTCP
KVSITCEACNKKLLREQLVKHTNDECSKRIAPCPAGCSDLIRYDQLQTHIQKNVPLHLKY
TLEATQQLARKIDERISALAAPASTSLNNEIARLSERIAVIERGGANTNGAAAASGGSFL
GDDIGAASRIAATELRVNAFEPIMGVLHKEIEKCNSTIEIVENKMSQESQHRDQYLRKVD
ELDLRMRNMEKAQEVKDRLSAQNDLRFQSMEFARYDGVLIWKISDFKQKRQDALTGKVTS
TYSPTFYTGHVGYKMCARLYPNGDGMGKGTHISLFFVLMRGNYDNLLSWPFKEKVTLMMI
DQNFKEHIVDTFRPDPQSSSFRKPQSEMNIASGCPLFLPLSRLQDPQYAYVKDDVMFVKI
SVEQETDSRLDLKTNNFVSPP
NT seq 1686 nt   +upstreamnt  +downstreamnt
atggcagcaagtaaagcgccacagccatcaccagaaggatataatttagaaatatttatt
aataaaaagccagatgagaagtttttatgtaacaaatgtgaattgatattacgtgaacca
gtacagagtccatgcggacatagatattgtcagtcatgttttaaggctatttgtggacat
acagatagccagataacatgtcaagcttgtgtgaaggaagatactgttgatcttgatatc
agttatcttcataaagacaagatgtatcctgatatggctataaaaagagaaatgggaaag
attcagtgtaaatgtgtaaatcaaggctgtagctggacaggtgtctttaaaaattacatg
acacatgaaatagattgtgaattccgtggaattacatgcaaggcatgtggtaaaaatata
cccgaatccaagatggaagaccatctgaagacaagttgtccaaaacgtaaagttcgatgt
gaaaattgtaatgctgaaattttgttttcggatattaaggagcataaaaagacttgtcct
aaagtcagcataacgtgtgaggcctgtaataaaaaattgctgagagaacagcttgtgaaa
catacaaatgatgaatgttctaaaagaattgcaccatgtcctgcaggatgctcagatctg
attcgatatgatcagcttcagacccatatccagaaaaatgttccattacatttaaaatat
acgctggaagcaacacaacaactggctaggaaaatagatgaaagaattagcgcattagcc
gcacctgcaagtacaagcttaaataatgaaatagctcggctgtctgagaggatagcagtc
atagaaagaggtggagctaacactaatggagcagctgctgcttctggaggctcatttctt
ggagatgatattggtgcagcttcccggatagctgcaacagaattacgagtaaatgcattt
gaaccaatcatgggtgttctacataaagaaattgagaaatgcaacagcactatagaaatt
gttgagaataaaatgtcgcaagaaagtcaacatcgagaccagtatttacggaaagttgat
gaacttgatttgaggatgagaaatatggaaaaagcccaggaggtcaaagacagactttca
gcgcagaatgatttacgttttcaatccatggagttcgctcgatacgatggtgtattaatt
tggaagatcagtgatttcaaacagaaacgtcaagatgccctaactggtaaagtcaccagc
acctattccccaacattctacacggggcatgtcggatacaagatgtgcgcacgactctac
ccgaatggtgacggtatgggaaagggaacgcatatttcattattctttgtattgatgcgt
ggtaactatgacaacttattgtcctggccatttaaggaaaaggtaactctgatgatgatt
gatcagaattttaaggaacacattgtcgacacatttcgaccagatccacaaagttcctcg
tttcgaaaaccacaatcagaaatgaacattgctagtggctgtccactgtttttaccgttg
tcaaggctacaggatccccagtatgcctatgtgaaggatgatgtaatgtttgttaaaata
agtgtggaacaagaaactgatagccgattggatttaaagacaaataactttgtttctcct
ccatag

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