Patella vulgata (common limpet): 126808639
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Entry
126808639 CDS
T09576
Name
(RefSeq) TNF receptor-associated factor 2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul04137
Mitophagy - animal
pvul04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126808639
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
126808639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126808639
04121 Ubiquitin system [BR:
pvul04121
]
126808639
Enzymes [BR:
pvul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126808639
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
126808639
Ubiquitin system [BR:
pvul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
126808639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
TRAF_BIRC3_bd
TRAF2_zf
zf_C2HC_14
zf_UBZ
zf-C3HC4_4
TRAFD1-XIAF1_ZnF
zf-C3HC4
PRP21_like_P
DUF2076
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
126808639
NCBI-ProteinID:
XP_050389494
EnsemblRapid:
ENSPVUG00005020292
LinkDB
All DBs
Position
1:complement(12250499..12262819)
Genome browser
AA seq
561 aa
AA seq
DB search
MAASKAPQPSPEGYNLEIFINKKPDEKFLCNKCELILREPVQSPCGHRYCQSCFKAICGH
TDSQITCQACVKEDTVDLDISYLHKDKMYPDMAIKREMGKIQCKCVNQGCSWTGVFKNYM
THEIDCEFRGITCKACGKNIPESKMEDHLKTSCPKRKVRCENCNAEILFSDIKEHKKTCP
KVSITCEACNKKLLREQLVKHTNDECSKRIAPCPAGCSDLIRYDQLQTHIQKNVPLHLKY
TLEATQQLARKIDERISALAAPASTSLNNEIARLSERIAVIERGGANTNGAAAASGGSFL
GDDIGAASRIAATELRVNAFEPIMGVLHKEIEKCNSTIEIVENKMSQESQHRDQYLRKVD
ELDLRMRNMEKAQEVKDRLSAQNDLRFQSMEFARYDGVLIWKISDFKQKRQDALTGKVTS
TYSPTFYTGHVGYKMCARLYPNGDGMGKGTHISLFFVLMRGNYDNLLSWPFKEKVTLMMI
DQNFKEHIVDTFRPDPQSSSFRKPQSEMNIASGCPLFLPLSRLQDPQYAYVKDDVMFVKI
SVEQETDSRLDLKTNNFVSPP
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaagtaaagcgccacagccatcaccagaaggatataatttagaaatatttatt
aataaaaagccagatgagaagtttttatgtaacaaatgtgaattgatattacgtgaacca
gtacagagtccatgcggacatagatattgtcagtcatgttttaaggctatttgtggacat
acagatagccagataacatgtcaagcttgtgtgaaggaagatactgttgatcttgatatc
agttatcttcataaagacaagatgtatcctgatatggctataaaaagagaaatgggaaag
attcagtgtaaatgtgtaaatcaaggctgtagctggacaggtgtctttaaaaattacatg
acacatgaaatagattgtgaattccgtggaattacatgcaaggcatgtggtaaaaatata
cccgaatccaagatggaagaccatctgaagacaagttgtccaaaacgtaaagttcgatgt
gaaaattgtaatgctgaaattttgttttcggatattaaggagcataaaaagacttgtcct
aaagtcagcataacgtgtgaggcctgtaataaaaaattgctgagagaacagcttgtgaaa
catacaaatgatgaatgttctaaaagaattgcaccatgtcctgcaggatgctcagatctg
attcgatatgatcagcttcagacccatatccagaaaaatgttccattacatttaaaatat
acgctggaagcaacacaacaactggctaggaaaatagatgaaagaattagcgcattagcc
gcacctgcaagtacaagcttaaataatgaaatagctcggctgtctgagaggatagcagtc
atagaaagaggtggagctaacactaatggagcagctgctgcttctggaggctcatttctt
ggagatgatattggtgcagcttcccggatagctgcaacagaattacgagtaaatgcattt
gaaccaatcatgggtgttctacataaagaaattgagaaatgcaacagcactatagaaatt
gttgagaataaaatgtcgcaagaaagtcaacatcgagaccagtatttacggaaagttgat
gaacttgatttgaggatgagaaatatggaaaaagcccaggaggtcaaagacagactttca
gcgcagaatgatttacgttttcaatccatggagttcgctcgatacgatggtgtattaatt
tggaagatcagtgatttcaaacagaaacgtcaagatgccctaactggtaaagtcaccagc
acctattccccaacattctacacggggcatgtcggatacaagatgtgcgcacgactctac
ccgaatggtgacggtatgggaaagggaacgcatatttcattattctttgtattgatgcgt
ggtaactatgacaacttattgtcctggccatttaaggaaaaggtaactctgatgatgatt
gatcagaattttaaggaacacattgtcgacacatttcgaccagatccacaaagttcctcg
tttcgaaaaccacaatcagaaatgaacattgctagtggctgtccactgtttttaccgttg
tcaaggctacaggatccccagtatgcctatgtgaaggatgatgtaatgtttgttaaaata
agtgtggaacaagaaactgatagccgattggatttaaagacaaataactttgtttctcct
ccatag
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