Patella vulgata (common limpet): 126827076
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Entry
126827076 CDS
T09576
Name
(RefSeq) TAR DNA-binding protein 43 isoform X1
KO
K23600
TAR DNA-binding protein 43
Organism
pvul
Patella vulgata (common limpet)
Pathway
pvul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pvul00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126827076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvul03019
]
126827076
Messenger RNA biogenesis [BR:
pvul03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
126827076
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
TDP-43_C
RRM_PARP14_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
126827076
NCBI-ProteinID:
XP_050412221
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All DBs
Position
7:29639189..29652218
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AA seq
437 aa
AA seq
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MSQYIQVAEEEGDEPMEVPSEDDGTLLLTTLAAQFPGSCGLKYRNPDTGSMRGIRLSDGR
LYPPDGNWARNLYIAVFPKGDNRKKVEEVPESLSLISKKKEKMKCSDLIVLGLPWKSTEE
DLRKYFSQFGELLMVQVKKDIKTGHSKGFGFVRFVDYDAQVQCISQRHMIDGRWCDVRIP
NSKVSLEGNHNLMNRKVFVGRCTDDMTAEDLRCYFSKFGEVVDVFIPKPFRAFAFVTFSD
SDTAQTLCGEDHIIKGASVHISSAAPKNNDKHLDRRVMNHTHLSLNPTYNQTSWSHPSRA
GSQGLGSQANMGGNLSNNLGLGNLGLGALQLNHAMIAAAQAVLSSQGGWGPLGLTNQGGA
SSTENPTTNASTTSFSNVTNGTMVSSPVGNHNGTPSSGVSGGFLGWGGQPQVTEVSSHSP
GHVSGWGTQSKTGSGWT
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtatattcaggtcgccgaggaggagggtgacgaaccaatggaagtaccaagc
gaagacgatggaacactcctcctcacaactttagctgcacaatttcctggatcttgtggt
ttgaaatatcggaatccagatactggctcaatgcgaggaattcgcctctccgatggacgg
ttgtatccccctgatggtaactgggcacgtaatttatacattgccgtcttccccaaagga
gataataggaaaaaagtggaagaagtacccgaaagtttgtcccttatcagtaaaaagaaa
gaaaaaatgaaatgtagtgatttgatagtacttggtttgccctggaaaagtacagaggaa
gatctcagaaaatatttcagccagtttggtgaattattgatggttcaggtaaaaaaggat
ataaagactggtcactcgaaaggatttggttttgttcgttttgttgactatgatgcgcaa
gtacaatgcatctctcaaagacatatgattgacgggcgttggtgtgatgtgagaataccc
aactctaaggtaagtttggagggtaatcataacttgatgaatcgtaaagtgtttgttgga
agatgtactgatgatatgactgctgaagacctccgatgttattttagtaaatttggtgag
gtggtagatgtttttataccgaaaccttttagagcttttgcctttgttactttctcggat
tcagacaccgcccaaaccctgtgtggagaagaccacatcataaaaggagccagtgttcac
atcagtagtgctgcaccaaagaacaatgataaacatctggacagacgtgtgatgaaccac
acccatctgagtttaaatcccacgtataatcaaacgtcatggtctcatccttctcgcgct
ggtagtcaaggtctaggaagtcaagccaatatgggtggaaatttgtctaataatctaggt
ttaggtaatctaggattgggagcgttacaactgaaccatgccatgatagctgcagctcaa
gctgtccttagtagtcaaggtggatggggtccattagggctgaccaatcaaggaggggca
agctccacagaaaacccaaccaccaacgcctccaccacaagctttagtaatgtcacaaat
ggcaccatggttagtagtcctgtgggaaaccacaatggtacacccagtagtggggtttca
ggaggatttttgggatggggagggcaaccacaagtgacagaggtctcttctcatagtcca
ggtcatgtgagtggatggggaacgcagagtaaaacagggagtggttggacttaa
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