Plasmodium vinckei vinckei: PVVCY_0902190
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Entry
PVVCY_0902190 CDS
T08061
Name
(RefSeq) splicing factor, putative
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03008
Ribosome biogenesis in eukaryotes
pvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVVCY_0902190
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PVVCY_0902190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvv03041
]
PVVCY_0902190
03009 Ribosome biogenesis [BR:
pvv03009
]
PVVCY_0902190
Spliceosome [BR:
pvv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PVVCY_0902190
Ribosome biogenesis [BR:
pvv03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
PVVCY_0902190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
UPF0147
RNase_P_pop3
Motif
Other DBs
NCBI-GeneID:
19961113
NCBI-ProteinID:
XP_008624781
UniProt:
A0A449BSU5
LinkDB
All DBs
Position
PVVCY_09:join(785684..785846,785997..786100,786228..786386)
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AA seq
141 aa
AA seq
DB search
MDSSDGANNSDAQENTTEVNAKIFPLASPELTNQILDVIQRATVYRQLRRGANEAVKSLH
KGISELVVLAADAKPLEIISHIPLVCEDKNTPYVYVRSKMALGRACGISRSVIATSIITK
DGSPLETQITELKDLIEQMLI
NT seq
426 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcagatggcgcaaataattccgatgctcaggaaaatacaacagaagttaat
gcaaaaatatttccattagcatctcccgaattgactaatcaaatcttagacgtcatacaa
agggcgactgtgtacagacaacttaggagaggcgcaaatgaagctgttaaaagtttgcat
aagggaatatcggaattagtagttttagcagcagatgctaagccattagagattatttct
cacatccccttagtttgtgaagataagaacaccccatatgtgtatgttagaagcaaaatg
gcgttaggacgtgcttgcggaatatcaagatccgtaatagcaacttcaataattacaaaa
gatggatcaccattagaaacccaaataacagaattaaaagatttaatagaacaaatgtta
atataa
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