Plasmodium vinckei vinckei: PVVCY_1003320
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Entry
PVVCY_1003320 CDS
T08061
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B, putative
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
pvv
Plasmodium vinckei vinckei
Pathway
pvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVVCY_1003320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvv03019
]
PVVCY_1003320
03041 Spliceosome [BR:
pvv03041
]
PVVCY_1003320
03032 DNA replication proteins [BR:
pvv03032
]
PVVCY_1003320
Messenger RNA biogenesis [BR:
pvv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
PVVCY_1003320
Spliceosome [BR:
pvv03041
]
Complex A
U1 snRNP components
Sm proteins
PVVCY_1003320
U2 snRNP components
PVVCY_1003320
Complex B
U1 snRNP components
PVVCY_1003320
U4/U6.U5 tri-snRNP components
PVVCY_1003320
Complex C
U2 snRNP components
PVVCY_1003320
DNA replication proteins [BR:
pvv03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
PVVCY_1003320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
19960318
NCBI-ProteinID:
XP_008623999
UniProt:
A0A449BU68
LinkDB
All DBs
Position
PVVCY_10:join(1243409..1243579,1243698..1244108)
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AA seq
193 aa
AA seq
DB search
MGKNYRLESWLQYRVRVTISDTRYYVGTFLSYDRHMNIVLVDAEEFRRVKCKENNFKEIK
RVVGLILIRGDNIVSFTAERAPVNKKTTSNITNKGIATGRGISLNNYVPMQNNMAPNMPT
GVGINMGTSKNLTPTMNPGFRPPNMPMNNKRPLMPMGMQMNPNLGPPNSGRGLPPQMPTQ
LPFPPNAKPPTEQ
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaactatcgattagaatcatggctacaatatagagtaagagtaacaataagt
gatacaagatattatgttgggacatttctttcatatgataggcatatgaatatagtttta
gttgacgcagaagagtttaggagagtaaaatgtaaagaaaacaactttaaggaaataaaa
agagtggttggtcttatattaataagaggggataatatagtttcgttcacagcagaacgt
gcacccgttaataaaaagacgacaagtaatataacaaataaaggtattgctactggccga
ggtatatctttaaataattatgtacctatgcaaaataatatggctcctaatatgccaaca
ggtgtaggtataaacatgggtacatcaaaaaatttaacaccaacaatgaatcctggtttt
agaccccccaatatgccaatgaataataaaagaccccttatgcccatgggtatgcaaatg
aatcccaacttaggacctccaaatagtggacgaggattacctcctcaaatgcctacccaa
ttgccattcccacctaatgctaaaccaccaacagagcaatag
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