Plasmodium vinckei vinckei: PVVCY_1406580
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Entry
PVVCY_1406580 CDS
T08061
Name
(RefSeq) DNA repair protein rhp16, putative
KO
K15083
DNA repair protein RAD16
Organism
pvv
Plasmodium vinckei vinckei
Brite
KEGG Orthology (KO) [BR:
pvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvv03400
]
PVVCY_1406580
DNA repair and recombination proteins [BR:
pvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
PVVCY_1406580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-RING_2
zf-PARP
zf-C3HC4
zf-RING_11
zf-Nse
zf-C2HC_2
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
FANCL_C
ResIII
Motif
Other DBs
NCBI-GeneID:
19958900
NCBI-ProteinID:
XP_008622598
LinkDB
All DBs
Position
PVVCY_14:join(2362049..2362235,2362380..2366803)
Genome browser
AA seq
1536 aa
AA seq
DB search
MDNSLDKLFSKQERLYKEIIEASCFYVKKLNEWIGDKHVKKLKLKKDDIDLTPKLLINRA
QSKASRCRVCGLGIEKKSLRIGYPSKDPRGNYGYISCWVHLDCSKKILYAVLYVEENKEC
LKKYLIDSEEITCTSDHNSYEQFIHKNIKWELFFGHYDELDDEEKEKLKEITKPYDAKDY
EHGKNSFEIFVKKEKDTVFSNNLMKTEKKQIINYELNVPKELKFELLKYQKEGVSWMINQ
ENSKHKGGILADEMGMGKTIQAITLILCQKINRMKCSEVNIKEIEEKIKEEKTEVCVKLE
QTNMTTYTSNMDDNSNLIKNEVKVKDEDSEKSIILIESDDNKCFGMKRKSKYFIKSEKEK
KSKKGNSKNNKTGKSFKNNGSEKVLHGQTLIIAPIAAVMQWKSEIEKFVEKDFLKVYIYH
GSNKKISSKELLEYDVVITSYAMVEINFRKIINKHKIACEYCGRLYLPSTLIIHQKYFCG
PNAVRTEKLKKRKKKNKDTALVAMKKFDDHFVPTPKNVFLEILNENKENVKDDKEIKVKS
RKGKEKLEKKNTKKNVPFEEDEVIVLSSRESESDSSESKKSIFSPLLRKTSSRVIDLCNV
GFEKEAIEKSIEDIYKKKKKNVQWNIVIKYVLANHLYSIDMNDKCKDVLVEIYLSNNNLE
DHELKSLNMGELKVLLITMGKHVFGTKIELINRVLVSAKYIRQEIEEEMKKLEDNNKKKG
GKNSKTTTKKGAKRSSIELNSHSDANYEHTSSKIKREDSDDTLTKDTGRSNRKRRSTVGS
CTVAKRENSNEMNKKVKKEQQNSNKKRKRCNSESSNDEDFSPRSSPRLATKSSSGVSSKR
SPRLASKSSGGLSSKGSPRLATKSSRGASSKRTSKLAIKSSDDSSVNYLGSQSGESSESF
YDDSENSSDTVMSYDSIIIEKNKIKNKNKKMKRKGSDIFDESLLHLIEWNRIILDEAHRI
KNRIASTSQSIFNLKCSGYRWCLTGTPLQNRIGELYSLIRFLEFYPYAYYFCSKKDCKCS
LINFEMKDNKYCTICDHTRMCHFNYFNKRILKPIQSFGYNGEGVNSMFYLKNEILDEILL
RRTKGEREKDIKLKPLIVSIRKDKLSNEEKDFYESLYKKTTTQFDKYVKSNTVLHNYAHI
FDLLSRLRQAADHPYLILFGNTFLSDPSGKFIKKNSAIIPAISNDFVCGICLENVPRKNN
VNTKCNHHFHKDCLKQYIESFELENKGTEGDENFGIKKYNTYNIVSNCSDTEKCDNTNMI
VFGNEDNNEGKNNSELNRNYKSLSVVKFKDRENSQFVSITNNIENIKDHPLGCPVCYVPL
TVDFNAFANEEDKIDDEEIIVCKEEVTHINKSFINRINTDEYQTSTKIEAIFEEVRNVIN
NTDDKCLIFSQYCSMLDLIEYHLKKNNIICSKLLGYMSMVSRNNILYNFNNDKQLRVLLI
SLKAGGEGLNLQVANRIFIVDPWWNPAAELQAIQRAHRIGQTKTVYAIRFIIENTVEEKI
IQLQNKKQLVFDCTIGNSGSAMQKLTKEDLAFLFHA
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggataatagtttggataaattattttctaagcaagaaaggctttataaggaaataatt
gaagcaagctgtttttatgtaaagaaacttaatgaatggataggtgataagcatgtcaaa
aaattaaaattaaagaaagacgatattgatttaactcctaaattactaataaatagggca
caatcaaaggctagccgatgtagagtgtgtggactgggtattgaaaaaaaaagtttaaga
ataggatatccatccaaagaccctagagggaattatggatacattagttgttgggttcat
ttagattgtagtaaaaaaatactatatgctgttttatatgttgaagaaaataaggaatgt
ttaaaaaaatatttaatagatagcgaagaaattacatgtacaagtgatcataatagttat
gaacagttcatacataaaaatataaaatgggaattattttttgggcattatgatgagcta
gacgatgaagaaaaagaaaaactaaaagagataactaaaccatatgatgcaaaagattat
gaacatggaaaaaatagttttgagatatttgtaaagaaagaaaaagatacagtattttca
aataatttgatgaaaactgaaaaaaaacaaataattaattatgaattaaatgtaccaaag
gaacttaaatttgaattattaaaataccaaaaagaaggtgtatcatggatgataaatcag
gaaaattcaaaacataaaggaggtatactagcggatgaaatgggtatgggaaaaacaata
caagcgataacattaatcttgtgtcaaaaaataaatagaatgaaatgtagcgaagtaaat
ataaaggaaatagaagaaaaaataaaggaggaaaaaaccgaagtttgtgtaaaactggaa
caaactaatatgactacctatactagtaatatggatgataattccaacttgataaaaaat
gaagtcaaagtaaaagacgaagactcagagaaaagcattattttgattgaaagtgatgat
aataaatgttttggaatgaaaagaaaatcaaaatattttattaaatctgaaaaagaaaaa
aagagtaaaaaggggaatagtaagaataataagacaggaaagagttttaaaaataatggt
tcggaaaaagtattacatggtcagacattaataatagcacctattgcagctgtaatgcaa
tggaaatcagaaatagagaaatttgttgaaaaagattttttaaaagtttatatatatcat
ggtagtaataaaaaaatatcttcaaaagaattattggaatatgatgttgttataacatca
tatgctatggtagaaattaattttcgaaaaattataaataaacataaaatagcatgtgaa
tattgtggtagattatatttaccatcaactttaattatacatcaaaaatatttttgtgga
cctaatgctgttagaactgaaaaattaaaaaaaagaaaaaaaaaaaataaagatacagca
cttgttgctatgaaaaaatttgacgatcattttgtacctaccccaaaaaatgttttttta
gaaattctaaatgaaaataaagaaaatgtaaaagatgataaagagataaaggtgaaatca
cgaaaagggaaagaaaaattagaaaaaaaaaacacaaaaaaaaatgtaccatttgaagag
gatgaagttatagtattaagttctagagaatcggaaagtgatagttctgaatcaaagaaa
tcgattttttctcctttgcttcgtaaaacatcaagtagagtaatcgatttatgtaatgta
ggttttgagaaagaagcaattgaaaaaagtattgaagatatatataaaaaaaaaaaaaaa
aatgtacaatggaatatagttataaaatatgtattagcaaatcatttatatagtatagat
atgaatgataaatgtaaagatgttttagtagaaatatatttaagtaataataatttagag
gatcatgaacttaaaagtttaaatatgggagaattgaaagtattattaataactatgggt
aagcatgtatttggaactaaaatcgaattaataaatcgtgtgttagtatctgctaaatat
ataagacaagaaatagaagaagaaatgaaaaagcttgaagataataataaaaaaaagggg
ggaaaaaatagcaaaactacgactaaaaaaggtgctaaaagaagttctattgagttaaat
agccatagtgacgcaaattatgagcatactagtagtaaaattaaaagggaagatagtgac
gatacattgacaaaggatactgggagaagtaatcgtaaaagacgtagcacagttggtagt
tgtacagttgcaaaaagagaaaacagtaatgaaatgaataaaaaagttaaaaaagaacaa
caaaatagtaacaaaaaaaggaaaagatgtaatagtgaaagtagtaatgatgaggacttt
tctcctagatcatctccgagattggcaactaaatcatctagcggtgtatcctctaaaagg
tcaccaagattggcatcaaagtcgtctggtggcttatcctctaaagggtcaccaagattg
gcaaccaaatcatctagaggtgcatcctctaaaaggacatctaaattggcaataaaatcg
tctgatgattcttcagtgaattatttgggtagtcaaagtggggaatctagtgaaagtttt
tatgacgacagtgaaaatagtagtgatactgttatgtcatatgattcgataattattgaa
aaaaataaaataaaaaataagaataaaaagatgaaaagaaaaggatctgatatatttgat
gaaagtttattacatttaatagaatggaatagaataatattagatgaagcccatagaata
aaaaataggatagcatcaacaagtcaatcaatttttaatttaaaatgttcaggttataga
tggtgtttaactggaacaccattacaaaataggattggtgaattatacagtttaatacgt
tttttagaattttatccatatgcttattatttttgttctaaaaaagattgtaaatgttct
ttaataaattttgaaatgaaagataataaatattgtactatttgtgatcatacaagaatg
tgtcattttaattattttaataagaggatattaaaacctatacaatcatttggatataat
ggggaaggagtaaatagtatgttttatcttaaaaatgaaatattagatgagatattactt
agaagaacaaaaggtgaaagagaaaaagatataaaattaaaaccattaatagttagtatt
cgtaaagataaattatctaatgaagagaaagatttttatgaatcattatataaaaaaaca
acaacccaatttgataaatatgttaaatcaaatacagttttacataattatgcacatatt
tttgatttattaagtagattaagacaagctgctgatcatccatatttaattctttttggt
aatacatttttaagtgatccatctggtaaatttataaaaaaaaattctgcaataattcca
gctatttcaaatgattttgtatgtggaatatgtttggaaaatgtgccacgaaaaaataat
gttaatacaaaatgtaatcatcattttcataaagattgtttaaaacaatatatagaaagt
tttgaattagaaaataaaggtactgaaggtgatgaaaattttggtataaaaaaatataat
acatataatattgtaagtaattgttcagatactgaaaaatgtgataatacaaatatgatt
gtatttggaaatgaagataataatgaagggaaaaataattctgaattaaatagaaattat
aaatctctttctgttgttaaatttaaagatcgagaaaattctcaatttgttagtataaca
aacaacattgaaaatataaaagatcatccattaggttgtccagtatgttatgttccatta
actgttgattttaatgcatttgcaaatgaagaagataaaatagatgacgaagaaattatt
gtatgtaaggaagaagttactcatattaataaaagttttataaatagaattaatactgat
gaatatcaaactagtacaaagattgaagctatatttgaggaagttcgaaatgttataaat
aatactgatgataaatgtttaatattttcacaatattgttctatgttagatttaatagaa
tatcatttaaaaaaaaataatattatatgttcaaaattattaggatatatgtcaatggtt
tcaagaaataatattttatataattttaataatgataagcaattaagagtattacttata
agtttaaaagcaggaggagagggattaaatttacaggtcgccaatagaatttttattgtt
gatccttggtggaaccccgctgcagaattacaagctattcaacgagctcatcgtatagga
caaacaaaaactgtttatgctattcggtttattattgaaaatactgttgaagaaaagatt
atccaattgcaaaataaaaagcagttagtatttgattgtactattggaaattcaggaagt
gccatgcaaaaattaacaaaggaagatttggcctttttattccatgcatga
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