Plasmodium vivax: PVX_094390
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Entry
PVX_094390 CDS
T01073
Name
(RefSeq) U5 small nuclear ribonuclear protein, putative
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
pvx
Plasmodium vivax
Pathway
pvx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVX_094390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvx03041
]
PVX_094390
Spliceosome [BR:
pvx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PVX_094390
Complex C
U5 SnRNP specific factors
PVX_094390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFG_IV
GTP_EFTU_D2
EFTUD2
EFG_III
EFL1
Pentapeptide
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
5473635
NCBI-ProteinID:
XP_001614346
UniProt:
A5K760
LinkDB
All DBs
Position
8:complement(205836..210019)
Genome browser
AA seq
1251 aa
AA seq
DB search
METKNNLYDEFGNYIGEDIDSDGDYSDGDQDEDADSDGGSDGGSDEDSHSDSHSDSDVGS
DVGSHSDGDTRRGKPKGRGRRKKKGGENESRSDDSQGGRPGENLDELQRAYEGVEVFVEQ
EDTQDIEEATINKINTNVERISFIKKLDVEANRKNFDLIETSLPNNTFSFKYLSQLMAHT
QFIKNICIAGHFHHGKTTFLDRIIEFTREKKESKTKLSYGSGMGCGGNPNSGTASFFHVN
AEMEGVPIRRNTPRKDNTSLVTPFNAKKIDHLVNYTDTRLDEQARGLSIKAIPISLILQN
KMYENISSNILLNKKKNNLKYKSYLFNIVDTPGHVNFFDEFLCAVNICECCCLVVDVTDG
CMYVTENVIKTCIYENVKLVLIVNCLDKLIMDLRLPPNDAYHKINYTIEEINKKIESFCD
MLNKSAKEKKRFLLSPLKNNVLFASSMYGVFFTLKSFSKIYCNLYSAYSIDIDEFAQHLW
GDLYFNERDFSFVSSPLYSNQRRSFVEFILNPIYKIFGYVCSEEKEFLIPFLKNFNITLK
KNDYLFSSKFLLKKINGMIFEDTTAFVDVILDNCPSPVENAKQKTRQIYSGSLKTKICYD
MMRCLKGDQTDNLMIYIIKNYHRPECIILDLFGRVMCGTIRKGQTVRILGEGYSPSDDED
MITRVVTHLWIYEGRYRVEVDEVPAGNFVLIGGVDICINKTCTITNVKRRKSATVKGANG
KGANVKGANVKGANVKGANVKGANVKGANVKGAKKDQLSGTKGTGMAPTLGSQNGLQKEE
RMLLEEDEAETEIFYPLHRKFRYINCANSVFKVACEPINPSELPKMLEGLRKIDKTYPLS
STKVEESGEHIILGTGELYLDCILHDLRKLYGDLEIKVSDPVVQFNETVIETSALNCFAE
TPNKKNKLHMIVEPMQKELVDDIVQGLVHLDRSERDAHVEEYLRALDGLLRQGGGAEEAA
EEAADQSDEPGEVPLNGDPPAEKHPNTLNYSLDKNVISLLTDKHNWDLLSIRSIWAFGPE
SNSPNVLVDDSLYKETNKESLYSIKENIIQGFCWATKEGPLIEECMKNVKVKILKGEIDD
DPINRGAGQIIPTARRAIYSSFLLATPRLLEPILFTEIICSGDSVSSVYNVLSRRRGHVL
KDFPKVGTPLYMVHAYLPAIESFGFETDLRTHTSGQAFCLSMFDHWHIVPGDPLDKSVVL
RPLEPAPIQHLAREFLLKTRRRKGLTEDVTINRFFDDPMLLNIKDEFAEYF
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaagaacaacctgtatgacgagtttgggaattacataggggaagacatcgac
agcgatggggactactcggatggggaccaagacgaggatgcggactcggacggaggtagc
gatgggggtagcgatgaggatagccattcggatagccattcagatagtgatgtaggtagt
gatgtaggtagccactcagatggcgatacccggcggggaaagccaaaggggagaggaagg
aggaaaaaaaaagggggggaaaacgaatctcgcagcgacgacagccaggggggccgcccc
ggggaaaacctagacgagctgcagagagcgtacgaaggggtggaggtgttcgtggaacag
gaagatacgcaagacatagaagaagcaacgatcaacaagataaacacaaatgtagagcga
atcagcttcattaagaagctagacgtggaggcgaacaggaaaaatttcgatttgatcgaa
acgagtctgcccaacaacacgttcagttttaaatacctatcccagttgatggctcacacg
cagtttataaaaaatatttgcatagcggggcacttccatcacgggaagacgaccttcctg
gataggataatcgaatttactcgagagaagaaggaaagcaaaacgaaactgtcctacggt
agtggcatgggatgcgggggaaaccctaacagcggcacggccagcttcttccacgtgaat
gccgaaatggagggagtaccaataaggagaaacaccccccgaaaggataacacatccctg
gtgactccatttaatgcgaaaaaaattgaccacctagtgaactacacagatacgaggctg
gatgaacaagcaagagggctatccatcaaggcaattcccatctccctcattcttcaaaat
aaaatgtatgaaaatatctcaagtaacattttactaaataaaaaaaagaacaacttgaaa
tataagtcttacctttttaatatcgtggacacccctgggcatgtcaatttttttgatgaa
ttcctatgcgcggtgaacatctgcgagtgctgctgcttagtggtggacgtcaccgatggg
tgcatgtacgtgacggagaatgttataaaaacgtgcatttacgaaaatgtgaagctggtg
ttaattgttaactgcttggataagctaataatggatttgcggctacccccgaatgatgcc
taccacaaaattaattataccattgaggagattaacaaaaaaattgaatcgttttgtgat
atgctgaacaagagtgcgaaggagaagaagcgatttctgttgtcccctctgaagaacaac
gtgctcttcgcttccagcatgtatggagtttttttcaccctcaaatcgtttagtaaaatt
tactgtaacttgtatagcgcatacagcatcgacattgacgaatttgcacagcacctctgg
ggagatctttactttaacgagagggacttctccttcgtgtcatctccactgtactccaat
cagaggaggtcatttgtggagtttatcttaaaccccatttacaaaatctttggctatgtc
tgctcggaagaaaaagagttcctcattccctttttaaaaaattttaacattacactgaag
aaaaacgactacctctttagcagcaaatttttacttaaaaagatcaacgggatgatattc
gaagacacaactgccttcgtggatgtcattttggataactgcccctccccagtggagaat
gcgaaacagaagacgaggcaaatttactccggctcgctaaaaacgaagatctgctacgac
atgatgaggtgccttaagggggatcaaacggacaacctcatgatttacattattaagaat
taccaccgaccggagtgcatcattttggacctcttcggtagggtcatgtgtggcacaatt
aggaagggacaaacggtgcgtatcttgggcgaaggttacagccctagtgacgacgaagat
atgatcactcgggtggttactcatttgtggatttatgagggtagatacagagtcgaggtg
gatgaggtccccgcgggaaatttcgtgctcattgggggggtggacatctgcattaacaaa
acgtgcaccataacgaatgtgaagaggaggaaaagtgcgactgtaaaaggtgcgaatgga
aaaggcgcgaacgtaaaaggcgcgaacgtaaaaggcgcgaacgtaaaaggcgcgaacgta
aaaggtgcgaacgtaaaaggtgcgaacgtaaaaggtgcgaagaaggatcagctgagtgga
acgaaaggaacgggaatggcacccactttaggatcccaaaacggtttgcagaaggaagag
cggatgcttctggaagaagatgaagcagaaacggagatattctaccccctacataggaag
ttcagatatatcaattgcgccaactccgtttttaaagttgcctgtgaacctattaaccct
tcggaacttcccaaaatgttagagggtttgaggaaaattgataaaacgtatcctttgtcc
agcaccaaagtggaagaatctggtgagcacataatcctggggacgggggaattatatttg
gactgcattttgcacgatttgaggaagctttatggggacctcgaaattaaggtgtccgac
cctgtggtgcagttcaacgagacggtgatcgaaacttccgctctgaactgcttcgcggag
acgcccaataagaagaacaaactgcatatgattgtggagccgatgcagaaggagctggtg
gatgacatcgtgcaggggttggtccacctggacaggagcgagcgggacgcccacgtggag
gagtacctgcgcgcgctcgacgggttgctgcgccagggggggggagcggaggaagcggcg
gaggaagcggcggaccaatcggacgaacccggcgaagtccctctgaacggagaccccccc
gcggagaagcacccaaacacgctgaattacagcctggacaagaacgtcatctcgctgctc
acggacaagcacaactgggacctcctctccataagatccatttgggccttcggcccggag
agcaacagcccaaacgtcctagtggacgattctttgtataaagaaacaaataaagaaagc
ctctactccattaaggagaacatcattcagggattctgctgggccacgaaggagggaccc
ctaatcgaggaatgcatgaaaaatgtgaaggtcaaaattttaaaaggagaaatagacgat
gacccaatcaataggggagctggccaaattattccaacagcgaggagagctatatattct
tcctttttattagctaccccgaggttattagaacccattttatttacagaaattatttgt
tcaggtgattctgtttcatctgtttataatgtgctgtctagaagaagaggacacgtgttg
aaagatttccccaaagtggggacccccctgtatatggtccacgcgtacttgccagccatt
gagtccttcggctttgaaacagatttgaggacccacacaagtggccaggcattttgcttg
agcatgtttgaccactggcatatcgttcccggggaccctctagacaagtccgtcgttcta
aggcccctggagcctgcccccattcagcatttggcccgggagtttttgctgaaaaccagg
aggaggaaggggctaaccgaggacgtcacgattaaccggttctttgacgaccccatgctg
ctcaacataaaggacgagttcgcggagtatttctga
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integrated database retrieval system
