Pistacia vera (pistachio): 116109297
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Entry
116109297 CDS
T07386
Name
(RefSeq) ABC transporter I family member 20-like
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116109297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvy03019
]
116109297
Messenger RNA biogenesis [BR:
pvy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116109297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_21
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116109297
NCBI-ProteinID:
XP_031251395
LinkDB
All DBs
Position
Unknown
AA seq
257 aa
AA seq
DB search
KTNTVRVLGRSAFHDTALTSSGDLSYLGGEWRREVAFAGFDVPIQMDVSAEKMVFGVAGI
DPQRRAELIKVLDIDLSWRMHKVSDGQRRRVQICMGLLRPFKVLLLDEITVDLDVLARAD
LLKFLKKECEVRSATIIYATHIFDGLENWPSHIVYVAHGKLQLAMPMNQVKEISKLSLMR
TVESWLRKERDEERKRRKERKASGLAEFGEQVEGSRVTGDPARAAVRALNNGWAAGRLQS
TVAGEENFFLSSNRVLR
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
aaaacaaatacngtgagggtacttggcaggtctgctttccacgacaccgctttgacctcc
tctggtgatctcagctaccttggaggagagtggaggcgggaggttgcttttgcagggttt
gatgttccaatacaaatggatgtttcggcagagaaaatggtatttggagtagcaggtatt
gatcctcaaagaagagctgaactaatcaaggtcttagatattgatctgtcatggagaatg
cataaggtatctgatggtcagagaagacgtgttcaaatttgtatgggtctcctcaggcct
ttcaaggtccttcttctggatgagataacagttgatcttgatgtgctagcaagggctgat
ctcctcaagtttctgaagaaggaatgtgaagtgcgtagtgccacaattatctatgctacc
catatatttgacggtttggagaactggccatctcatattgtgtatgtggctcatgggaag
ttacaattggcaatgccaatgaatcaagttaaggagattagcaagctgtcactaatgaga
acagtggagagttggctgaggaaggaaagagatgaggagaggaaaagaagaaaagaaaga
aaggcaagtggtcttgctgaattcggagaacaagttgagggaagccgtgtaactggggat
ccagctcgtgcagccgttcgtgcactgaacaacggttgggctgcaggaaggctgcagtcc
acagttgctggtgaagagaactttttcttgagctcaaacagagttctgaggtag
DBGET
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