Pistacia vera (pistachio): 116136756
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Entry
116136756 CDS
T07386
Name
(RefSeq) transcription factor PIF1 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116136756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvy03000
]
116136756
Transcription factors [BR:
pvy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
116136756
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
116136756
NCBI-ProteinID:
XP_031278279
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MYHCVPDFDMDEDCSIPTSSVLTRPKKSAMPDQDDVMELLWQNGQVVLQSQTQRTHKRST
PAKFDDAVIPAHQSGSREIPSHQHQHQHQHQDRLFMQEDEMTSWLHYPLNDTNFDSDFCA
DLLYPVPCVTTNTTATPPVRTNRVSDSRPPKTTTATASRPPIPPPRMTESFVQFSRPRPV
TETSGPSNSKSLMVRESTVVDSSDTPAVGPESRVSEAVRSTEGASGMNNVCRTLSGAGLA
GTSSAGGGGAGGGAGTRDLTTFEMTVTSSPGGSSASAEPAQKPPAEDRKRKGREADDECH
SEDFELESADAKKQIRGSTSTKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKVSD
KASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMFPGMQQYMPNMGMGIGMGMGMGMGMDMG
MNRPMMPFPNVLAGSPLPTPAAAAHLGPRFPMPAFHMPAVPGPDPSRIQATNQSDPMLNS
FSMQNPNQPRVANFVDPYQQYLALHQMQFPLQQNQSMTLPSASKPSSSKGAENPENQPSG
T
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtatcactgtgttccggattttgacatggacgaggattgctcgatccctacatcttca
gttctaacacgccctaaaaaatcagctatgcctgatcaggacgatgttatggagttgctg
tggcaaaacgggcaagtcgttttgcaaagtcagacacagagaactcataagagatcaaca
ccggctaaattcgatgacgccgtcattccagctcaccaatcaggttccagagagatcccc
tcacaccagcaccagcaccagcaccaacaccaagaccgcctcttcatgcaagaagacgaa
atgacttcttggcttcactatcctctaaacgacaccaatttcgactccgatttttgcgcc
gatcttctctatccagttccttgcgttactactaacaccaccgccactcctcccgttcgt
acaaatcgcgtatccgattcacgcccaccgaagactacaactgctacggcttcaaggcct
ccgattcctccaccgagaatgacggagagtttcgtgcagttctcgagaccaaggccagtg
actgaaacgtcaggtccgtcaaattcaaaaagtctgatggtgagagaatcgacggttgtg
gactcaagtgatacaccagctgtggggcctgaatctagagtttcagaggcggtgaggagt
acggagggtgcatcgggaatgaacaacgtgtgcaggaccttgagcggtgctggattggca
ggtacgtcatcagctggtggagggggagctggagggggagctggaacaagagatttaacc
acgtttgaaatgacagtgacgtcatcaccaggcggctctagcgctagcgccgagccggct
cagaagccgccagctgaagatcgtaaacgcaagggaagagaagccgacgacgagtgtcac
agcgaggactttgagttggaatctgctgatgcgaagaaacaaattcgtggatcaacatca
acaaagagatctcgtgctgcagaggtccacaatctctcagagaggagacggcgagatagg
ataaatgaaaagatgaaggctttgcaagaactcatacctcgttgcaacaaggtatcagac
aaagcttcaatgctagatgaggcaattgagtacctgaaatctcttcagttgcaagtgcag
atgatgtcaatggggtgtggcatggtcccaatgatgttccccggcatgcaacagtacatg
ccaaacatgggaatgggaattgggatgggcatgggcatgggcatgggcatggatatggga
atgaatcggcctatgatgccatttcccaatgttttggctggttcaccgttgccaacacca
gctgctgcagctcatttgggtccgaggtttcctatgccagccttccatatgccagctgtt
cctgggcctgatccatccagaattcaagcaacaaaccagtcagatcccatgttaaactct
ttcagtatgcaaaatcctaaccagccacgggttgcaaattttgttgacccttatcagcag
tatcttgctctccaccagatgcagtttcccctacaacagaatcagtcaatgaccctgcca
agtgcaagcaagccaagtagcagcaagggagctgagaatccagaaaatcagccatcagga
acgtga
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