Pistacia vera (pistachio): 116143263
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Entry
116143263 CDS
T07386
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 15-like
KO
K12126
phytochrome-interacting factor 3
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy04075
Plant hormone signal transduction
pvy04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
116143263
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
116143263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvy03000
]
116143263
Transcription factors [BR:
pvy03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
116143263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
116143263
NCBI-ProteinID:
XP_031284579
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All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MMEENPEIAQRANLTSMSDKEVFELVWENGQLLMRDLPRRAQRGPSINVHPSHDSSINAH
VHVKNGGDTFPQKRAGFETLDSILDNSYHDRNSFYMNFTHNKSLEDDNFHESLPEVYQTH
FNVFLEQNKGNSYDKFHKDSQVVPVHEDANLKKGCHSNYFTQTPQHASTGQPDKSSNKQY
QESVSFKRARTNSRQNLGSMRDFPVTKLQDQDLESDGRKATTNFSLFLGSPGLLQVNSQR
SGVKMPTTIPATLSSAEGLNNNCKRSSPCSNIIPLESMSIAPANGSKTVKGFHYQPNLME
ATIELLPPAAKPSDKSLPDYESEACCRDDASPNQVYGQTSNIAANQAKRKLNNTQKAIEL
PVASSSLCSRGASNNPTYTLKRRYDDTEGSADHPSQNIERKATSVIKEVPGSKSKPKGMT
KAFPGIKSNSEKRTAEFHNLSERKRRDKINKKMRALQELIPNCNKVDKVSMLDEAIEYLK
NLQLQVQMMSMGNRVYMPPMLLPNGMQQLHPQMTHFSPIRMQMGSGCNPFPPHFLFPPIP
GATAMPGFAPQLLPMSLLPAQLGLGLLNTTVRLPAVSPASASAPTQPMVSATLSNSKDSI
HKIIPEEGKSKVVKSSKIHSPN
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagagaaccctgaaatcgcccagcgagctaatttaacttccatgtctgataaa
gaagtttttgagctggtatgggaaaatggccaacttctcatgcgagatttgcccaggaga
gctcaaaggggcccctcaatcaacgttcatccttctcatgactcttcgattaatgctcat
gtacatgttaaaaatggcggagacacctttcctcaaaagagggcagggtttgagacttta
gattccatcttggataactcttatcatgatcggaatagcttttatatgaattttactcac
aacaagtctctggaagatgataactttcatgaatcattacccgaagtgtatcaaacccat
tttaatgtgtttttggaacaaaataaaggtaatagttacgataagtttcataaggactcc
caagttgttcccgtacatgaagatgcaaatttgaaaaaggggtgtcactctaattatttc
actcaaactcctcaacatgcctcgacgggccaacctgataagtcctccaataagcaatac
caagaatcagtttcattcaaaagggcaaggacaaattcaagacaaaatctgggatcaatg
cgtgatttccccgtcacaaagttgcaggatcaagatttagaatctgatgggagaaaggcg
acgactaacttttctcttttcttaggatctccaggtcttcttcaagttaacagtcagcga
agtggtgttaaaatgcccacaacgattcctgcaactttatcaagtgctgagggtttgaat
aacaactgtaaaaggtctagtccatgcagtaacattatccccttggagtcaatgtcaatt
gctccagcaaatggttcaaaaactgttaagggttttcattatcaacccaatttaatggaa
gcgactattgagctgttaccaccggctgctaagccttcagataagtcactcccagattac
gaatctgaagcttgttgtcgcgacgatgcttcccccaaccaagtttatggccaaacctca
aacatagcagcaaatcaagccaagcgaaagctcaataatactcaaaaagctatagagtta
ccagtggcatcttcttcgttatgctcacgtggagcttcaaataatcctacatacacttta
aagaggagatacgacgataccgaggggtcagccgatcatccgagtcaaaatattgagaga
aaagcaacgagtgtgataaaagaagtgcctggaagcaaaagcaaaccaaagggtatgact
aaagcatttcctggaatcaaaagtaatagcgaaaagcgaactgcagaatttcataattta
tctgaaaggaagcgaagagataaaatcaataagaagatgcgtgcactacaggagctcata
cccaattgcaataaggtagacaaagtttcgatgcttgatgaggccattgagtatctaaaa
aatcttcagcttcaagtacagatgatgagtatgggaaatagggtgtacatgcctccaatg
ttgttacctaatggaatgcaacaactccacccacaaatgactcatttttctcccataaga
atgcagatgggtagcggctgcaacccattcccaccacacttcttatttccaccgattcca
ggagctactgctatgcctggcttcgcgcctcaactgttacccatgtctctattacctgca
caattgggtttggggcttctcaacacaactgtaaggttgcctgctgtctctcctgcttct
gcttctgccccaacccaacccatggtttctgctaccctatctaattcaaaggattccatc
cacaaaattattccagaagagggaaaaagcaaagttgttaaatcctcaaagattcattca
cccaattag
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