Pistacia vera (pistachio): 116146973
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Entry
116146973 CDS
T07386
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase kappa
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
pvy
Pistacia vera (pistachio)
Pathway
pvy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pvy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116146973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvy03400
]
116146973
Enzymes [BR:
pvy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116146973
DNA repair and recombination proteins [BR:
pvy03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
116146973
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
zf_UBZ
CDCA
Motif
Other DBs
NCBI-GeneID:
116146973
NCBI-ProteinID:
XP_031288255
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MEKEKNESSSSNGNPKPWQSYHTVYTNAKAGMDGVDKEKVQRVVYEMSKGSKYFENEERM
EVFIRQKIEHMRARCAKLTPHDISHYLKVADTRVPELEATRDLSRTWLHVDMDAFYAAVE
TLSDPSLKGKPMAVGGMSMISTANYEARRFGVRSAMPGFIARKLCPELNFVPTDFKKYTY
YSDLTRKVRFLLSEKILXXTCSYHLQISXFAPSAFXFSTNYDPNFMATXLDEAYLDNTEV
CRRGALAVQNSTVSSLSCCFGYYLQKVNDHRISFFRLLDINKPNGQFVLPNDRMAVMTFI
SPSIRKIGGIGKVTEHILRDVFGINTCEEIXEKQSDFLVLKTFHYCRFFLSVGLGLGGTA
TPQIRSRKSMSNERTFSATEDKAFLYRTLAKIAEMLSADMEKEGLRGRTLTLKLKTASFE
VRTRAVTLQKHICSSEDIFKHASVLLKAELPVSLRLIGLRMSQFNEEKVGASADPTQKTL
TNFIMSGDASRKNVGHDNCLGSDVSDHHFMDDKETSISLGIRKRSHCVFRDSFDNKCVPD
LDDNYHRFTYNVGEAEKIHEPSSDETAEKENKSDMIGHSPKYHHNEESQLLEANSSVLQH
YEGSHHDRIEAANSLDKEAVSSSNQEDQNFWVDDYKCSLCGIEMPPTFVEERQEHSDFHL
AQRLQEEESGSDLRMLMPPQRCVRKDPASHGKRKKLKSDKKEGRHLSIDMFFVKSNQNF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagaagaacgaaagctcatcatcaaatggaaatccaaagccgtggcaatct
tatcacactgtttacaccaacgctaaagcaggtatggatggagtggacaaggagaaagtg
caaagagttgtgtatgagatgagcaagggatccaagtattttgagaacgaggaacgcatg
gaagtctttattaggcagaaaattgaacacatgcgcgctcgatgtgccaagcttacacca
catgacatctcacactatctgaaggtagcggataccagagttccagaactagaagctaca
cgtgacctgtctagaacttggctacatgtagatatggatgctttctatgcagctgtagaa
acattgagtgatccttctttaaagggcaagccaatggctgttggcggcatgtcaatgatc
tccactgctaattatgaggcgcgaaggtttggggttcgttctgcaatgcctggcttcatt
gcacgtaaactgtgtccagaattaaattttgttcccacagattttaagaagtatacgtat
tacagtgatttaactagaaaggttagatttctgctttcagaaaagattttgtgatgaaca
tgcagttatcacttgcaaatctcttaatttgctccctctgctttttagttttccacaaac
tatgatcctaacttcatggcaactnagttggatgaagcatatcttgacaatacagaggtc
tgccgaagaggggcattagcagttcagaatagtactgtttcatctttatcttgttgcttc
gggtattatctgcagaaagtaaatgatcatagaatatcattcttcaggttgctagatatt
aacaagccaaatggacagtttgttttaccaaatgaccggatggctgtgatgacatttata
tccccttccattagaaagattggaggcattggtaaggtcactgaacatattttaagagac
gtttttggaattaatacatgtgaggagatataggagaagcaatcggattttttggttctg
aagacatttcattattgcagattttttctctctgtcggactggggcttggaggtacagct
acccctcaaatcaggtccagaaaaagtatgagtaatgagagaaccttctcagccacagaa
gacaaagcatttctttatcgcacattggctaaaattgcagagatgctatctgctgatatg
gaaaaagagggtcttcgtgggcgaactctaactcttaaactgaaaactgcttcttttgag
gttcgaaccagagcagtcactctgcaaaaacatatttgctcaagtgaggacatcttcaaa
catgcttcagtgctgcttaaggctgaacttccggtttcattaagacttataggcctgcga
atgtctcagttcaatgaagaaaaggttggtgcctcggcagatcctactcaaaaaactctc
accaactttatcatgtccggagatgcttctaggaaaaatgttggtcacgataattgcttg
ggatcagatgtcagtgatcaccatttcatggatgataaagaaactagtatctctcttggt
attcgcaagagaagtcattgtgtatttagagattcatttgacaacaaatgtgtaccagat
ctagatgataactatcatagattcacctacaatgttggtgaagcagagaaaattcatgag
ccttcaagtgatgaaactgcagaaaaggagaataagtctgacatgatagggcattctccc
aaatatcatcacaatgaagagtcacaactgttagaagccaattcttcggttctccagcat
tatgagggcagccaccatgacagaatcgaggcagctaattccctggacaaagaggctgtg
tcttcatctaatcaagaagatcaaaatttctgggtggatgactacaagtgttcattatgt
ggaatagagatgccaccaactttcgttgaggaaaggcaagagcactctgattttcacctt
gctcagaggcttcaggaggaggaatctggctctgacttgagaatgctgatgccgccgcaa
aggtgtgtccggaaggatcctgctagtcatggtaaacgcaagaagctgaagtcggataag
aaagaaggtagacatctttccattgacatgttctttgtgaagagcaatcagaacttctag
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integrated database retrieval system
