Pectobacterium versatile: OA04_23840
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Entry
OA04_23840 CDS
T07772
Symbol
ypdA
Name
(GenBank) Sensor kinase regulating yhjX
KO
K27884
two-component system, LytTR family, high-concentration pyruvate sensor kinase [EC:
2.7.13.3
]
Organism
pvz
Pectobacterium versatile
Pathway
pvz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OA04_23840 (ypdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvz01001
]
OA04_23840 (ypdA)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pvz02022
]
OA04_23840 (ypdA)
Enzymes [BR:
pvz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
OA04_23840 (ypdA)
Protein kinases [BR:
pvz01001
]
Histidine kinases
LytTR family [OT]
OA04_23840 (ypdA)
Two-component system [BR:
pvz02022
]
LytTR family
PyrS-PyrR (pyruvate reutilization)
OA04_23840 (ypdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5TM-5TMR_LYT
His_kinase
HATPase_c
GAF
ECF-ribofla_trS
ECF_trnsprt
GAF_2
GAF_3
HATPase_c_2
Motif
Other DBs
NCBI-ProteinID:
AVT58938
LinkDB
All DBs
Position
complement(2586987..2588732)
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AA seq
581 aa
AA seq
DB search
MHEIFEMLLAVFDRAALMLICLFFLTRTSQFRQLLQKEQHSPGERVTVTAIFSLFALFGT
YSGINVEGSLVNVRVIAVMSGGILFGPWVGIATGIIAGAHRYLIDIDGITSVPCLITSII
AGITSGYINKKVKKEQQWSIGILGGMLCESLTMLLVVAWATPIELGLDIVSKIAVPMILG
SVCIGLIVLLVQSVANEKEVIAARQAKLALDIAHKTLPYFRNINSDSLTAICRIIRTEIN
ADAVAITNTQHIQAYVGIGEEKYNIGHDIISPMTQQAIHDGKIIIKNNDEQHLTPEIHSM
IVIPLWEHGQVTGTLKIYYRHAHKITYSLRVMAVGLSQIMSTQIEVSRTEQLRDMANKAE
LRALQSKINPHFLFNALNAISSSIRINPDTARQLVINLSRYLRYNLELNDDALIDIKKEL
YQIQDYIAIEQARFGAKLTVIYDIDDDLAYKIPSLLIQPLVENAIVHGIQPCRGKGTVVL
SVKERGDKLLVTVKDTGNGISQETMDRVARNELPGNRIGLLNVHHRVRLLYGDGLHIRRL
EPGTEIYFYIPREDKTPSALPDTIQVPQSGDSAAEQTGGNP
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgaaatatttgagatgctccttgcggtcttcgaccgcgccgcgctgatgctgatt
tgtctgtttttcctgacaagaaccagtcagttccggcaattactgcaaaaagagcaacac
tcgccaggagagcgggtgacggtgacggctatcttttcactgtttgcgctgttcggtacg
tattccggcattaatgttgaagggtcgctcgtcaacgtgcgcgtgattgccgtgatgtcc
ggcggtattctctttggtccttgggtagggattgcaactggcatcattgcgggtgcgcac
cgttatctcattgatattgatggtatcacctccgtaccttgcctgattaccagcatcatc
gctggtatcacttccggttacatcaataagaaagtcaaaaaagagcagcagtggagcatc
gggattctgggcggtatgctgtgtgagtcgttaacgatgctgctggttgtggcatgggcg
acgccgatcgagttagggctggatattgtctcaaagattgcggtgccgatgattcttggc
tccgtttgtattggcctgatcgtcctgctggtgcaaagcgtggcgaatgaaaaagaggtt
attgccgccagacaggccaaactcgcgctggatatcgcacacaaaacactgccgtatttc
cgcaatatcaacagcgattcactgacggccatctgtaggatcattcggactgaaattaat
gcagatgcggtagcgataacgaacacgcagcacattcaggcgtatgtggggattggggaa
gaaaaatataatatcggccacgatataattagcccgatgacacagcaggcgatccatgat
gggaaaatcatcattaaaaataatgatgaacagcacctgacgccggaaatccattcgatg
attgtcatcccgctgtgggaacacgggcaggtgaccggcacgctgaaaatctattatcgt
catgcgcataaaattacctattcattacgcgtgatggctgtcggtttatcgcaaatcatg
tcaacgcaaattgaagtgtcccgcaccgagcaactgcgtgatatggcaaataaagcggag
ttgagagcgctgcaaagtaaaatcaatccgcactttctttttaatgcgctgaatgcgatc
tcctcgtctattcgtattaatcccgataccgcgcgccaactggtgatcaatctgtctcgc
tatttacgctataacctcgaactcaacgacgatgcgctgatcgatataaaaaaagagttg
taccagattcaggattatatcgcgattgagcaggcgcggttcggtgccaagctaacggtg
atctacgatatcgacgacgatttagcgtacaaaatccccagtttgttaattcagccgctg
gtggaaaacgcgattgtgcatggtattcaaccttgcagaggtaaagggactgtggtgctg
tctgtgaaggaacggggcgataaactgctggtgacggtaaaagacacgggtaatggcatt
agtcaggaaacgatggatcgcgtcgcgcgtaacgaattgccagggaatagaattggtctg
ctgaatgtccaccatcgggtccgcttgctctatggcgatggcttgcatattcgccggctg
gaaccggggaccgaaatttatttctacattccacgagaagataaaaccccgtcggcgttg
ccggatactattcaggtgccgcagtcgggagattctgctgctgaacaaacaggaggcaac
ccatga
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