Pectobacterium versatile: OA04_25810
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Entry
OA04_25810 CDS
T07772
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumB
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
pvz
Pectobacterium versatile
Brite
KEGG Orthology (KO) [BR:
pvz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvz03009
]
OA04_25810 (rumB)
Enzymes [BR:
pvz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
OA04_25810 (rumB)
Ribosome biogenesis [BR:
pvz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
OA04_25810 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Methyltransf_32
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AVT59125
LinkDB
All DBs
Position
complement(2814689..2815819)
Genome browser
AA seq
376 aa
AA seq
DB search
MHCARYSTGTCRSCQWLEKAYPQQLSDKQQHLEDLLQPHAVQRWLPVQPSAQSAFRNKAK
MVVSGSVERPLLGMLHRDGTMVDLCDCPLYPPSFAPVFDVLKVFIARAGLTPYNVARRRG
ELKYLLLTESTQRGTFMLRFVLRSETKLAQLRAALPWLQQQLPQLEVISANIQPVHQAIM
EGKTEIILSDAAALAEQFNQVPLYIRPQSFFQTNPQVAAALYATARDWVAELDITSMWDL
FCGVGGFGLHCASPEMRLTGIEISAEAIACARRSAEQLGLKQVEFQALDSTQFATAKAEI
PDLVLVNPPRRGIGSELCAYLSRMAPDYILYSSCNAESMAKDMTALANYRALRVQLFDMF
PHTAHYEVLTLLKREI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgcccgctacagcacgggaacctgtcgttcctgccaatggttggaaaaagcc
tacccgcagcaattgtctgataagcaacagcatcttgaagatttgctgcaaccgcacgcc
gtgcagcgctggttgcccgtgcaaccttctgcgcagtctgcatttcgtaataaagccaaa
atggtggtgagcggcagcgtggaacgcccgctgctggggatgctgcatcgtgatggaacg
atggtggatctctgcgattgcccgctttatccgcccagcttcgcgccggttttcgatgtg
cttaaggtcttcattgctcgggcagggctgacgccttataacgtggctcgacgtcgcggg
gagctgaaatacctgctactgacagaaagtacgcagcgcggtacgttcatgctgcgcttt
gtcttgcgctcagaaaccaagctggcgcagctgcgagctgcattgccgtggctacagcag
caattgccccagcttgaggtcatatccgccaatattcagcctgtgcatcaggcgattatg
gaagggaaaacggagattatcctgagtgatgctgccgcgctggcagaacaattcaatcag
gtaccgctgtatattcgcccgcaaagctttttccagacgaacccgcaggtggcagccgcg
ctgtatgcgacggcacgcgattgggttgcagagttggatattactagcatgtgggatctg
ttttgcggggtagggggttttggcctgcactgtgcgtcgcctgagatgcgtctgacgggc
attgaaatcagcgctgaggcgatagcctgtgcgcgtcgctctgcggaacagttaggattg
aagcaggtggagtttcaggcgctggattcaacgcagttcgcgacggctaaagctgaaatc
cccgatctggtgttggtcaatccgccgcgccgcggtatcggcagtgaactatgtgcctac
ctgagccgcatggcaccggactatattctctattctagctgtaacgccgaaagcatggca
aaagacatgacggcgctggcgaattaccgcgcactgcgcgtacagctattcgacatgttc
ccgcacacggcacactacgaagtgctgacgttactgaagcgggaaatatag
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