Pectobacterium parmentieri WPP163: Pecwa_1963
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Entry
Pecwa_1963 CDS
T01106
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumB
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pwa03009
]
Pecwa_1963
Enzymes [BR:
pwa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
Pecwa_1963
Ribosome biogenesis [BR:
pwa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pecwa_1963
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Methyltransf_32
UPF0020
Motif
Other DBs
NCBI-ProteinID:
ACX87742
LinkDB
All DBs
Position
2130866..2131993
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AA seq
375 aa
AA seq
DB search
MHCARYSTGTCRSCQWLEKAYPQQLSDKQQHLEGLLQSHAVQRWLPVQPSVQSAFRNKAK
MVVSGSVERPLLGMLHRDGTAVDLCDCPLYPSSFLPAFDVLKAFIARAGLTPYNVARRRG
ELKYLLLTESTQRGTFMLRFVLRSETKLAQLRVALPWLQQQLPQLEVISVNIQPVHQAIM
EGKTEIILSDAAALAEQFNQVPLYIRPQSFFQTNPQVAATLYATARDWVAELNITSMWDL
FCGVGGFGLHCASPEMRLTGIEISAEAIACARRSAEQLGLKQVEFQALDSTQFATAKSEI
PDLVLVNPPRRGIGSELCAYLSRMAPDYILYSSCNAESMAKDMTELANYRALRVQLFDMF
PHTAHYEVLTLLKRA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgcccgctacagcacgggaacctgtcgttcctgccaatggctggaaaaagcc
tacccacagcaattgtctgataagcagcagcaccttgaaggcttgttacaatcacatgcc
gtacagcgctggctacccgtgcagccttctgtgcagtctgcatttcgtaataaagccaaa
atggtggtgagtggtagcgtggagcgcccgctgttggggatgttacaccgtgatggaacc
gcagtggatctctgtgattgcccgctttatccgtccagtttcttgcctgctttcgacgtg
cttaaagccttcattgcccgtgcggggctgacgccttataacgtggcgcgccgccgtgga
gaactgaaatacctgctgctgacggaaagtacgcagcgcggtacgttcatgctacgcttc
gtcttgcgctcggaaaccaagctggcacaactacgtgtcgcattgccctggctacagcag
cagttaccccagcttgaggtgatatccgtcaatatccagccagtgcatcaggcgattatg
gaagggaaaacggagattatcctgagtgacgctgccgcgctggccgaacagtttaatcag
gtgccgctatatattcgtccgcaaagctttttccagacgaacccgcaggtagcggctact
ctgtatgcgacggcacgcgactgggtcgctgagttgaatattaccagtatgtgggatctg
ttttgcggagtagggggttttggtctgcactgtgcatcacccgagatgcgtttaacgggc
attgaaatcagcgccgaggcgatagcctgcgctcgtcgctcggcggaacagttagggttg
aaacaggtggaatttcaggcgctggattccacgcagttcgcgacggcaaaatcagagatc
cccgaccttgtgttggttaacccgccgcgccgtggtatcggcagtgaactgtgcgcctac
ctgagccggatggcaccggactacattctctattccagttgtaacgcggaaagcatggca
aaagacatgacggaactggcgaattaccgcgcgttgcgcgtacagttgttcgatatgttc
ccgcacacggcgcactatgaagtgctgacgttactgaagcgtgcttga
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