Pleurodeles waltl (Iberian ribbed newt): 138245700
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Entry
138245700 CDS
T10800
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04010
MAPK signaling pathway
pwl04020
Calcium signaling pathway
pwl04510
Focal adhesion
pwl04518
Integrin signaling
pwl04540
Gap junction
pwl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
138245700 (PDGFRB)
04020 Calcium signaling pathway
138245700 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
138245700 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138245700 (PDGFRB)
04540 Gap junction
138245700 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
138245700 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pwl01001
]
138245700 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
pwl04090
]
138245700 (PDGFRB)
Enzymes [BR:
pwl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
138245700 (PDGFRB)
Protein kinases [BR:
pwl01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
138245700 (PDGFRB)
CD molecules [BR:
pwl04090
]
Proteins
138245700 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
C2-set_2
Ofd1_CTDD
Motif
Other DBs
NCBI-GeneID:
138245700
NCBI-ProteinID:
XP_069055632
LinkDB
All DBs
Position
7:complement(905911119..906140137)
Genome browser
AA seq
1092 aa
AA seq
DB search
MWVHLPAMAIHWMTTLFLLKGFLVVSGNARPRIVPSTPPELVLDLSSTLSLTCEGEEVVA
WEHDTDPLDLPVKHKGNVFSSTLTLKNLTGLDTGRYTCFYNHSQDEEHREAEEVYIFVPD
PTRWFLPNEANGEFIFQTSTSESILPCRVTNPEAHVTLHERTKESHIPVIYDRQLGFRGH
FEDTLYLCKAEYDGQEEYSDHYYVYTIPVSTFTASISASQTLVKKGDNFTVICAISGNEL
VHFSWEYPRMEVGLIVEPVTDFESGSLGDIHSILPIDSAELTDSGIYRCNVTEVLQDAQD
TKTINITVVERGFVKLQMNRNTTQFADVHKSRSFEVLIEAYPRPTIVWQKDNINLTEDNK
NQISISNRKLSEYRYHSNLSLVRVKEDEGGLYTLQVFNEDDAQEFSFHLQINVPAQVLLL
KDFHHDVSGGQVVVTCISKGMPLPEITWYTCHDMKRCNGNGSEPWKALENSSSVLELETN
YTAIQPKEQVFLVKSTLQFQSVEETLSVRCLAQNFLGADNLEVTLVPNSLPFKLALISAI
LALVFLVVIFFIILIALWRKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDYSWELARE
KLVLGRTLGSGAFGRVVEATAHGLGHSNSAMKVAVKMLKSTARTSEKRALMSELKIMSHL
GPHLNIVNLLAACTKGGPIYIITEYCRYGDLVDYLHRNKHSFLHYCMEKGQTETGISDPS
GGQVQSLNSVSVESDGGYMDMCKDDLNYVPMINMKGEIKYADIEPSNYGTTYELDSYSPS
APERTDNTLLINDSPILSFWDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVK
ICDFGLARDIMKDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSYGILLWEIFTLGG
TPYPELPMNEQFYNALKRGYRMSKPVHASEDIYEIMRKCWDEKYEARPSFTQLVQLMGNL
LGQDFKEKYEKVNEEFLRSDHPAVVRARPRVKNHIITANTGPEEHLNPISYTMVAPNSDN
DYIIPLPDPQPEEAEEVASGTGESRPSSALEEGHTASTISCESPLELQDEEAQKVPCQEQ
ECESPEVEESFL
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgcatcttccagccatggccatacattggatgacaaccctcttccttctcaaa
ggtttcctggtggtgtctggaaatgccaggccccgcattgttccgagcactccccctgaa
ctggtcctggatctctccagcaccctctccttgacgtgtgagggagaggaggtggtggcc
tgggagcatgatacagatccactggatttgccggtgaaacacaaggggaatgtcttctcc
agcacactcacactgaaaaacctgacgggtctagacacaggaaggtacacctgcttctac
aaccactcccaggatgaagagcaccgggaggctgaggaggtctacatcttcgtaccagat
cctaccaggtggtttcttcctaatgaggccaacggagaattcatttttcagactagcact
tcagagtccatcttgccgtgccgggtgaccaacccagaagcacacgtcaccctccatgag
cgaacgaaggagagccacatccccgtcatctacgacagacagctcggcttccggggacac
tttgaagacacgttgtatctctgcaaggcggagtatgatggacaggaggagtactccgac
cactactatgtgtataccatcccagtctccaccttcacggcctccatcagcgcatctcaa
actctggtgaaaaagggtgataactttacggtcatctgtgccatcagtggtaacgaactg
gtgcatttcagctgggagtatccacgaatggaggttggcctgattgtggagcctgtgact
gattttgagtccgggagtctgggagatatccattccattcttcccatagacagcgcagag
ctcacagactctggaatatacaggtgcaatgtcactgaggtcctccaggatgctcaagat
acaaagaccatcaacatcactgtggttgagcgcggatttgtgaagctccagatgaaccga
aatactacccagtttgctgatgtgcacaagagtagatcatttgaggtgctgatcgaggca
tacccaagaccaacaatcgtatggcaaaaggacaatatcaacctgactgaggacaacaag
aatcagatctccatctccaacaggaagttgtcagaatacaggtatcacagtaatttgtcc
ctcgtgcgagtgaaggaagatgaaggaggactttacacacttcaagtttttaatgaagac
gatgcccaagagttctcctttcaccttcagattaatgtgccagcccaagtactgttgttg
aaagatttccaccatgatgtcagtggagggcaagtagttgtgacctgtatcagcaaagga
atgcccttgccggaaatcacatggtacacctgccacgacatgaagaggtgcaatgggaat
ggatcggagccttggaaagcgctggaaaacagctccagtgtgctggagctggagaccaac
tacactgccatacaaccaaaggagcaggttttcctcgtgaagagcacactgcagttccag
agcgtggaagagaccctgtctgtacgctgcttggcacaaaactttctgggcgccgacaac
ctggaggtgacattagtgccaaactccttgccattcaagctggcgctcatttctgccatc
ctggcgctggtgttcctggtggtgatattttttattatcctcatcgcactatggcgaaag
aagccacgttatgagatccgctggaaggtgatcgagtcagtaagctcggatggacatgaa
tatatctatgtggaccccatgcaactgccctacgactacagctgggaacttgcacgtgaa
aagcttgtgctaggtcggaccctgggttctggcgccttcggaagagtagtggaagcgaca
gcacatggcctcggccattctaattctgcaatgaaagtggctgtgaagatgctgaaatct
acggctaggaccagcgagaagcgtgccctgatgtctgaactgaagattatgagtcacctg
ggccctcatctcaacattgtgaacctgctggctgcatgcactaaaggaggtcccatctac
attattacggaatattgtcgctatggggatcttgtggactatctgcaccggaataagcac
agcttcctgcactactgcatggaaaagggacaaaccgagactggaatcagtgacccgagt
ggtggacaagtgcagagcctgaactctgtttctgtggaaagcgatggtggatacatggac
atgtgcaaggatgacctgaactatgtcccaatgattaatatgaagggagagataaagtat
gctgacattgaaccctccaactatggcaccacatacgagctggatagctattcaccatca
gctcctgagaggacagataataccctcctgatcaacgattcccccatcctgagcttctgg
gaccttgttggcttcagctatcaggtagccaatggaatggagttccttgcttccaaaaat
tgcgttcaccgggacttggctgcaaggaatgttctgatttgtgaagggaaactggtgaag
atttgtgattttggcctggcaagagacatcatgaaggactcaaactacatttcaaaaggc
agtacatttttgcccctaaaatggatggcaccagagagcatcttcaacaacctttacaca
acactgagtgatgtttggtcttatggcattcttttatgggagatatttaccttaggtgga
accccttacccggagctgcccatgaatgagcaattctacaatgccctaaaacgaggttat
cgaatgtctaagcctgttcatgcatcagaagacatctatgaaataatgcgcaagtgttgg
gatgagaagtatgaggcaaggccatcgttcacccagttagtgcaactgatgggaaatctg
cttgggcaagacttcaaagagaaatatgaaaaggtgaacgaggagtttctgagaagtgat
catccagcagttgttcgagcaagacccagagtaaaaaatcacattatcacagccaacact
ggcccagaagagcatttgaacccaatcagctacacaatggtggcccccaacagtgacaat
gactatatcatccctctcccggatccgcagcccgaggaagcagaggaagtcgccagtggg
acaggggagagccggcccagctctgctttggaggaggggcacactgcgtccaccatctcc
tgcgagagcccgctggagcttcaggatgaggaagcgcagaaggtgccatgccaagaacaa
gagtgtgagtcaccggaagtggaggagagcttcctgtag
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