Pleurodeles waltl (Iberian ribbed newt): 138248641
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Entry
138248641 CDS
T10800
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pwl04040
]
138248641 (TRPC6)
Ion channels [BR:
pwl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138248641 (TRPC6)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
ING
Motif
Other DBs
NCBI-GeneID:
138248641
NCBI-ProteinID:
XP_069058479
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Position
8:1361596256..1361997860
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AA seq
845 aa
AA seq
DB search
MFNDRSTSLSLDEERFLDAAEYGNIPVVRKMIEECLSLNVNCVDYMGQNALQLAVANEHL
EITELLLKKENLARVGDALLLAISKGYVRIVEAILSHPSFAEAKRLTTSPSQSELQHDDF
YAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRKGARIERPHDYFCKCNECSEKQKHDS
FSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLANIEKEFKNDYKKLSMQCK
DFVVGLLDLCRNTEEVEAILNGDVESNRTNIEPGGRPSLSRLKLAIKYEVKKFVAHPNCQ
QQLLSIWYENLSGLRQQTIAVKCLVVLAVAVGLPFLSVVYWVAPCSKLGKILRGPFMKFV
AHAASFTIFLGLLVMNAADRFEGTKLRPNETNTDNSKQLFRMKTSSFSWMELLIISWVIG
MIWSECKEIWSQGPREYMFELWNILDFGMLAIFAASFIARFMAFWHASRAQNYVDESIKD
LANATLPPEIEYYTFARIKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQIS
LGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSHYLGAKQNDAFTTVEESFKTLFWAIFGLS
EVKSVIINYGHKFIENIGYVLYGVYNVTMVIVLLNMLIAMINSSFQEIEDDADVEWKFAR
AKLWFSYFEEGRTLPVPFNLVPSPKSLVCALLRIRECLSRLLSCHKKAYREDSEMNKVEV
GKKLGIVGKHQKSSSLALTRTTLGHSKHSSIRSSEDGNLNSINNSPTKYQKIMKRLIKRY
VLKAQIDKESDEVNEGELKEIKQDISSLRYELLEEKSHNTEDLAELIRKLGEKLAIETGL
LDSNR
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatgaccgctcgacaagtctctctttagatgaagaacgtttcttggatgcagct
gaatatggaaatattcctgtggtgagaaaaatgattgaagaatgcctctcactgaatgtt
aactgtgttgactatatggggcagaacgctttgcagttagctgttgccaacgaacatctt
gaaattacagaacttctcttgaagaaagagaatctggcacgtgtcggagatgcattgctc
ctggcaataagtaaggggtatgttcgaatagtagaagcaatcctgagccatccttctttt
gctgaagccaagagactcacaacaagccccagccaatcagaactccagcacgatgatttc
tatgcatatgatgaggacgggacaaggttctcgcatgatgttacacccatcatcctggct
gcccactgccaggaatatgaaatagtgcacacccttttacgtaaaggagctcgtatagaa
agacctcatgactatttctgcaagtgcaatgaatgcagcgagaaacagaagcatgactct
ttcagccattccagatccagaatcaatgcttacaaaggactagcaagccccgcctacctc
tccttatccagcgaagacccagttatgactgccttagagctcagcaatgagctggctgta
ctggcgaacattgaaaaagaatttaagaacgactacaaaaaattgtctatgcaatgcaag
gactttgttgttggactcctcgacctgtgcaggaacactgaagaagtagaagccattttg
aatggcgatgtggaatccaaccgcactaacattgaacctgggggacggccaagcttaagt
cgcttaaaacttgccattaagtatgaagttaagaagtttgtagcgcatccaaattgccag
cagcaacttctttccatttggtacgagaacctctcaggccttcgccagcagaccattgca
gtgaaatgccttgttgttctggctgttgctgtgggattgccatttctctccgttgtttac
tgggtggcaccctgcagcaagcttggaaagatcttgcgaggcccattcatgaagttcgtg
gctcacgccgcctccttcaccattttcctcggtttgctggtcatgaatgcagctgacaga
tttgaaggcaccaaactccggcctaatgaaactaacaccgacaactcaaaacagctgttc
aggatgaaaacctccagcttctcgtggatggagctgctcattatctcctgggtaataggt
atgatatggtcggaatgcaaggaaatttggtctcaaggtccgcgggaatatatgtttgag
ttatggaatattcttgattttggaatgttagcaattttcgcagcatcattcattgcaagg
ttcatggcattttggcatgcctccagagcacagaactatgttgatgagagcatcaaggac
ttggccaatgcgaccctgcctcctgaaatagaatactacacttttgccagaataaaatgg
ttgccgtctgatcctcaaatcatttcggaaggtctctatgcaattgctgtggttttaagt
ttctctcgcattgcctacatcctcccggccaatgaaagctttggacctctgcaaatatct
ctgggcagaactgtgaaggatattttcaaattcatggtaatatttatcatggtgttcgtg
gctttcatgataggaatgttcaacctctattcccattatcttggagcaaaacaaaatgat
gccttcacaacggttgaagagagttttaaaaccctcttttgggctatattcgggctttct
gaggttaagtcggtgatcattaactatggacacaagtttattgaaaatattggatacgta
ttgtatggagtgtacaacgtgaccatggtgattgttcttctcaatatgctaattgcaatg
atcaacagctcgttccaggaaatagaggatgatgctgatgtggaatggaaatttgcaaga
gctaagctgtggttttcctattttgaagagggaaggactcttccagtgccctttaacctc
gtaccaagccctaagtcattagtttgtgctttactaagaataagggaatgcctttccaga
ttgctctcctgtcataagaaggcatatcgggaagattcagagatgaacaaggtagaagta
ggcaaaaagttagggatagtcggcaaacaccaaaaaagcagcagtttggctctgaccaga
accacccttggccacagtaaacattcaagtattcgaagttcggaagatggaaatttaaac
agcataaacaacagtccaacaaaataccagaaaatcatgaaaagactcataaaacgatat
gtgctcaaagctcaaattgataaggaaagtgatgaggtcaatgaaggtgaactgaaagaa
atcaaacaagatatatcgagtcttcgttatgaacttctggaagaaaaatcacacaatact
gaagatcttgcagaacttataagaaagctgggggagaaacttgcaatagagactggactg
ctagacagcaacagataa
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