Pleurodeles waltl (Iberian ribbed newt): 138248710
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Entry
138248710 CDS
T10800
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3-like
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138248710
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138248710
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138248710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
zf-rbx1
zf-RING_2
TPR_16
TPR_1
zf-C3HC4_2
zf-C3HC4
TPR_2
TPR_11
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
TPR_17
TPR_19
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
138248710
NCBI-ProteinID:
XP_069058643
LinkDB
All DBs
Position
8:1419525260..1420735806
Genome browser
AA seq
1962 aa
AA seq
DB search
MEDLKFDPNEFVKNVSFTETPNYCIYGHSKSFKIALYDDNTIDPVKYWLHRPRKEVHDDC
DVLKIRIFWTMMFEKNAVSVAEWGCMMTSGFDLTNLAVIEFLEDFLELFKSVADIPCFIR
GFVSMENKITDKTFHLGDVLEWVKASGNTVMIHQLLLFGDKVLPLLEEVIGQYTFFLNRM
AGNLSSMKKEEDQGLCTLCVKKSESSKTKGNKEFSKKNYQSAVKLYTKAIQYHPENHILY
GNRALCYLQIAEYTLALADGKRAIILKQNWYKGHHRFCDALFLIGDFQRALASNEKALVL
CKKDPEGIKELSQQNLRFREFIEKKKGEGLGDLDAHYMPFPFAFASNMEPGIPTPMYVSR
IRLERDKTAPVPTGSAKKTEAKDSANIFDTENIKIPSELPSARKGVNTRTNSRSPHGKSR
TKSKEPEKQRQPEVSKHDPPDIPKCNPGSTTSAINLSELQEKLKTLVETGHTALFDQCFH
SAEQAFSQLLDLVDPAELKKLHLAMIDYVVLIYGHAKALLGIGQPEELTTAEQQFNKIIE
KYTKQRFNCLAFYGIGNVHLRRNRFAEARNQFIKCQIMLNCKIVPGVLKWPTTSVIIEET
RPEKLQMLLEKCIEECKFPPKPDAICHYPLCTGGNNKQIYFTDPDFEGFIRLFCCHLCKV
EFHIDCWKNLKATKYFDKNDKDCLKDQCFTPDCEGNICRIVIYGSTGLVKWQGETKITEV
KVSRKPIVKQKNSSPKKLKVKQERKLRRKLHEKVAKYSVKDRKESMTNEENSSKEVLLND
KSVKICGADPMLQLVKENAELIKMGVHNTSLLISNLFMWLVINQEEHMIYSTSITNSTQY
EVMAMLINHLIKKSDKVKTRIFLHILSQLHEVDTKLHSWLKEINDLGLLAADVFLSHYLH
HLLQLDLESLCSLWNETYGNRLNSLITCSELSEVVEYFDEQSPELKRCLIWFLEEYKERY
QCPVLHQALDKYFNVIDHPCVAISKQENKVIHSIKVKNKTRKKKQKESKPLLLLPECGTA
AQELDHICAENNALDSNEPVVVSKNICDQVAEFESRYEDISRSSFYLKIMDNKADLTRES
LYEYFYQILDKHGPLELDSDLFVGEYNLFPPKAHKIVEEAGGLKPFLLGSLRFVMLSDNL
IGTLKHNFFNTEATATFPRRFGLQVKNAKPVSSVQSMYNSNKNLLCDHLTINPGAKEFKP
VFDGFHNSSNSQDSSNNSAPATQNDENVSSVNTLLSNSITNSQPVPFLFSAGKSASLVDE
TPLSSVPAKDHMQPVSFVNPPSKTVVQAFCSEKSETGSPECELKVACDTGSAPNSVSSST
VKVDKDSSDTQNPHQSLKAENLFLGSNSGTSINCVPCSDNVVKKMRPRKKTPLTRMVAVQ
VVIELSDHNVNTDPFYPFEKHQGDILRMEKEHQVLQEQLKEATEKYELSKSRNSDEVALG
KEQLQKVIEENKISKTELDWFYQDLENEVKKWQQEKKEHQERLRVIKNNIKVLMENNESC
LKSIEEKEQHYKRLLNEFLESSNKFENEKLKFEENIKKCKDSILESKKRASASEVTVLEN
QKNIEIFKLCCAMSSCEANLHFLHSVGTSASAPGHLGSQIISWNNYLSSIKNEIQNIQSQ
FEVRIDLVKSGAKLSSLQPVQVETFQSPPSIFIMQSNTLIDYPAVLTYSSASQLHNSLFP
EYSSSVSLGSVPQEGGNTETSSNSTPLDHSSFEVLNVSGGCPPSKQATFNQSFQPDVNNP
GLGGSSSISDVQPLASQVVNAGIAKKDQKNPYDKLIAQLNAIFPHYDGAELSSFVKATRA
KNGNNFSGLEFCEVISRVTEFILDYQSKTSSHRETHITSDSLGQAGSERNEGTNCVNVNG
AKGNPPSTMFVSQSTQPWKCVKETPKSSWGKSNESALPDDEPCIICHEELRQNIICVLEC
GHQFHKHCIKTWLNAQSTCPTCRVHVLLNEDFPVLRSRKRPT
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttgaagtttgatccgaatgaatttgtgaagaatgtctctttcacggaaaca
cccaattactgcatctatgggcacagtaaatcttttaaaattgccctctatgacgacaat
actattgatcctgtcaaatactggctccatcgaccaaggaaagaggtgcatgatgactgt
gatgttttaaagattcgtatcttctggacgatgatgttcgagaaaaatgctgtttctgtt
gctgagtgggggtgcatgatgacctcaggctttgatttgacgaatctagcggtcattgaa
tttcttgaagactttctggagctattcaaatctgtggccgacattccttgttttatccga
ggctttgtgtcaatggagaataaaataacagataaaacctttcatctgggtgatgtttta
gaatgggtgaaagctagtggcaatacagtgatgattcatcagttactactttttggagat
aaagttttgccacttttagaagaagttatcggtcaatataccttctttttaaataggatg
gcaggtaacctatccagcatgaaaaaggaagaggatcaaggattgtgtactctttgtgtt
aagaaaagcgaatcatcgaagacaaagggaaataaagagttttccaaaaaaaattatcaa
tcagctgtcaaattgtatactaaagccattcaataccaccctgaaaatcacattctatat
ggcaaccgagccctttgctatctgcaaattgctgaatacacactggcccttgctgatggc
aaaagagctattattctcaagcagaattggtataagggtcaccatagattttgtgatgct
ctgtttctaattggagactttcaacgagcactcgcttccaatgagaaggcactggtactg
tgcaaaaaggatccagagggtataaaggagcttagtcaacaaaacctaaggtttcgagaa
tttattgaaaaaaaaaaaggtgaaggactaggagatttagatgcacattacatgcctttt
ccatttgcttttgcctcgaatatggaacctggcattcccactccaatgtatgtttcaagg
atcaggctagaacgtgataaaacagcaccagtccccacaggaagtgccaagaaaaccgaa
gccaaggattctgctaatatatttgatacagaaaatataaagataccttcagagctccct
tcagctcgtaagggagtaaatacacgtaccaattccagaagccctcatgggaaatctagg
acaaaaagcaaagagcctgaaaaacagagacaacctgaagtttcaaaacatgaccctccg
gatattccaaaatgtaatcctggtagcactacctcagcgattaatttgagtgagcttcaa
gaaaagttgaagacccttgttgagaccggccacacagctctgtttgaccagtgttttcac
agcgctgagcaagccttttcacagttgttggatttggttgatcctgccgagttgaagaaa
ctgcaccttgctatgattgactatgtggtgcttatttatggacatgctaaagctctgttg
ggaatagggcagccagaggaattaacaacagctgaacagcagttcaacaaaataatagaa
aagtacaccaagcagagatttaactgtttggcattctatggaattggaaatgtgcattta
aggagaaacagatttgcagaagccagaaatcagttcattaaatgccagattatgctgaat
tgtaaaatagtgcctggagtattaaaatggcccacaacttctgttattattgaagagacg
aggcccgaaaaactgcagatgctgttagagaaatgtattgaggagtgtaaatttcctcca
aaacctgatgcaatatgccattatccactgtgcacgggaggcaacaataagcaaatctat
ttcaccgatccggattttgagggatttattcgtctgttctgctgtcacctgtgtaaagtg
gagtttcacattgactgttggaagaatttgaaggcaacaaagtactttgataagaatgat
aaggattgtctgaaagaccaatgctttactcctgattgcgaagggaacatttgtcgtatt
gttatctatggttctactggtctggtgaaatggcagggtgaaactaaaattactgaagtg
aaagtctctcgaaaacctatagttaaacaaaaaaattcaagccctaagaaactaaaagta
aaacaagagcgaaagttaagacgaaagttgcacgaaaaggtagcaaaatattcagttaaa
gatagaaaagaatccatgacaaatgaagagaactcttcaaaggaagtattgcttaacgac
aagtcagtgaagatatgtggtgctgaccctatgctgcaacttgttaaggaaaatgctgag
ctcattaaaatgggtgtccacaacacctctttgcttattagtaatttattcatgtggctt
gtaataaaccaggaagagcacatgatctattccacaagcatcaccaactctactcagtat
gaagttatggctatgcttattaatcatttgatcaagaaaagtgataaggttaagacaaga
atctttcttcacatattgagtcagctccatgaagtggacacaaaactacactcctggctt
aaagagatcaatgatttaggtcttttggcagcagatgtttttctgtcacattatctccat
cacttactgcagcttgacctggaatcactctgtagtctttggaacgaaacatatggtaac
agactgaactctctgatcacctgcagtgaattatcggaagtagtagaatatttcgatgaa
caatcacctgagctaaaacggtgtctaatatggtttttagaagagtataaagaaagatat
cagtgtccagtactgcatcaagctttggataaatattttaatgtaattgatcatccatgt
gttgcaataagtaagcaggaaaataaagttattcatagtatcaaagttaaaaataaaacc
cgaaaaaagaaacaaaaagaatcaaagcctttattattgttgcctgaatgtggtacagcc
gctcaagaacttgaccatatatgtgcggagaataatgcattagattcaaatgaaccggtt
gtagtttcgaaaaatatctgtgatcaggtggctgaatttgagtcaagatatgaagatatc
tcaagaagtagtttttatttgaagataatggataataaagcagacctaacacgggaaagt
ctatatgaatatttctatcagatcctagataaacacggacctctggaattggacagcgac
ctgtttgtgggagaatataatctttttcctccaaaagctcacaagatagtagaagaagct
ggtggactgaagccttttcttctagggtcactccgctttgttatgctcagtgacaaccta
ataggaacgttaaagcacaatttttttaatacagaagctaccgctacattccctagaaga
tttggattacaagtaaagaatgcaaaacctgtatcatctgtgcagtccatgtacaattca
aacaaaaatttgctttgtgaccatttgactataaaccccggtgcaaaagaattcaaacca
gtgtttgatggttttcacaattctagtaacagccaggattccagtaataactccgcacca
gctactcaaaatgatgaaaatgttagcagtgtaaacaccttattatctaattccattaca
aactctcaacctgttccatttctatttagcgctggaaaatctgcctctcttgttgatgaa
acacctttgtcgtcagtgcctgcaaaggatcacatgcagccggtgtcattcgtgaatcct
ccatcaaagactgtggttcaggcattctgcagtgagaaatctgagactggaagtcctgaa
tgtgaactaaaagtagcttgtgatacaggcagtgcaccaaatagtgtctcatctagtaca
gttaaagtggacaaggattcttctgatacacaaaatccccaccaaagtttgaaggctgag
aacttattcttgggttcaaacagtggtacttcaattaattgtgtaccttgttcagataat
gtggtgaagaaaatgagacctagaaagaaaacaccccttacaagaatggtggcagtgcag
gttgttattgagttgtctgaccacaatgtaaataccgatcctttttatccatttgaaaaa
catcagggggatattttacgaatggaaaaagagcatcaggtattgcaagagcaacttaag
gaagcaactgaaaaatatgaactgtcaaagtcgcggaactctgatgaagttgctcttgga
aaagagcagttacaaaaagttatagaagaaaataagatttcaaagacagaacttgattgg
ttttaccaagatttagaaaatgaagtgaaaaaatggcagcaagaaaagaaagaacaccag
gaaagattaagagtaataaagaataatatcaaggttctgatggaaaacaatgaatcatgc
ctaaaaagcattgaagagaaagagcaacactataaaagattgttgaatgaatttctggaa
agcagcaacaaattcgaaaatgagaagttgaaatttgaagagaatattaagaaatgcaaa
gatagtatactagaaagtaagaaacgagcaagtgcatcagaggtgactgttctagaaaac
caaaagaatattgaaattttcaagttgtgctgcgccatgtcaagttgtgaagcaaatctt
cattttctgcattcagttggaacaagtgcctcagctcctggtcaccttggatcacagatt
atatcgtggaacaactacctttctagcattaagaacgaaattcagaatattcagtcgcaa
tttgaagttcgaatcgatttggtaaaaagtggtgcaaagctaagtagtctccagccagtg
caggttgaaacatttcagtctcctcctagtatatttataatgcaatccaacactttaatt
gattatccagctgtccttacatattcttccgcatctcagctacataattctttgtttccc
gaatattcaagttctgtcagtctgggttctgtaccacaagagggaggcaatacagaaaca
tcttcaaactcaacacctttggatcattcttcgtttgaggtacttaatgtttctggtgga
tgtccaccatctaagcaagctactttcaaccagtcttttcaaccagatgtgaataatcca
ggcctgggtggaagcagctctatctctgacgttcagccattggcatcccaagtagtaaat
gctggcattgcaaagaaggaccaaaagaatccatatgataagctcatcgctcaactaaat
gctatatttccacactacgatggtgctgaactttccagctttgtaaaagccacacgggcc
aaaaacggaaacaacttttctgggttagagttctgcgaggtaatcagcagggtgaccgaa
tttattttggattatcaaagtaagacatcatcacatagagaaacacacattactagtgat
tccttgggacaagctgggagtgaaagaaacgaaggaaccaactgcgtaaatgtgaatggg
gctaaaggaaatccaccttcaacaatgtttgtatcacagtcaacccagccttggaagtgt
gtcaaagagacacctaaatccagctggggaaaatcaaacgaatctgctttacctgatgat
gagccctgcataatatgccatgaagagctacgtcagaatattatatgtgtactagaatgt
ggacaccaattccacaaacattgcattaaaacctggttaaacgcacaaagtacttgccca
acatgtcgtgttcatgtcctcctgaatgaagatttcccagttcttagaagcaggaagcga
cctacttaa
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