Pleurodeles waltl (Iberian ribbed newt): 138259646
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Entry
138259646 CDS
T10800
Name
(RefSeq) homeobox protein otx5 isoform X1
KO
K09337
cone-rod homeobox protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138259646
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
138259646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
138259646
NCBI-ProteinID:
XP_069063604
LinkDB
All DBs
Position
9:557026951..557083541
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AA seq
294 aa
AA seq
DB search
MMSYIKQPHYAVNGLALAGPGMDLLHSAVGYPLSIFSATPRKQRRERTTFTRAQLDILEA
LFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQSSGQAKPRPAKKKSSP
ARETSSETSTNGQYSPSGAVNSVTPSSSASATVSIWSPASISPIPDPMSASNAPCMQRSA
AYPMSYSQAPAYTQSYGGSSSYFSGLDCGSYLSPMHPQLSAPGSTLSPISNPNMGSHLSQ
SPASLSAQGYGTAGLGFSSVDCLDYKDQTSWKLNFNATDCLDYKDQSSWKFQVL
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcctacatcaagcaaccgcactatgccgtcaacgggctggccctggccgggccc
ggcatggacctcctgcactcggccgtgggatatcccttgtctatcttctcagcgactccg
aggaagcagcgtcgagagcgcactaccttcacccgggcacagctggacatcttggaggca
cttttcgccaagacccgttaccctgacatcttcatgagggaggaggtagctctgaagatc
aacctgcctgaatctcgagtgcaggtctggttcaagaaccgtagagccaagtgccgtcag
cagcagcagcagagcagtggccaagctaagccccgtcccgccaagaagaaaagctctcct
gctcgtgaaaccagctctgaaactagtaccaatgggcaatacagtccatcaggggccgtc
aactcagtcaccccaagctcttctgccagcgctacagtgtccatttggagcccagcctcc
atctcacccatcccggaccccatgtctgcctccaacgcaccctgcatgcagaggtcagct
gcttatccaatgagctactcccaggcacccgcctatacccaaagctatggagggtcctcc
tcttacttcagtggccttgattgcggatcttacttgtctccgatgcacccccagttatct
gctccagggtccacactgagtcctatttcaaacccaaacatgggcagtcacctgagccag
tctccagcctctttatcagctcagggctatggaacggcaggtctcggcttcagctctgtc
gactgcttagattacaaggaccaaacgtcgtggaagctcaacttcaacgccactgactgt
ctggattacaaagaccaaagttcctggaagttccaggttttgtaa
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