Pleurodeles waltl (Iberian ribbed newt): 138260540
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Entry
138260540 CDS
T10800
Symbol
THBS1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04115
p53 signaling pathway
pwl04145
Phagosome
pwl04148
Efferocytosis
pwl04350
TGF-beta signaling pathway
pwl04510
Focal adhesion
pwl04512
ECM-receptor interaction
pwl04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
pwl04131
]
Endocytosis
Phagocytosis
Opsonins
138260540 (THBS1)
Glycosaminoglycan binding proteins [BR:
pwl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138260540 (THBS1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138260540
NCBI-ProteinID:
XP_069065256
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Position
9:1192943264..1193029803
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AA seq
1176 aa
AA seq
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MALYGGLLLLLMISVYEAKRISDPGSDDDGVFDLFELVGFTRKAVSRRAGAVHLVKGPDP
SSPAYRIEDAERIPPVPEEKFQDLLDAISADRGFILLATLRQGKKTRGTLMAVERKDGSG
HVFSLVSNGRAGTLDLSLSAEGKQQVVSMEDALLATGHWKNITLFVQEDRAQLYVGCDKM
ENAELDIPIQDIFNRDLATSARLRVAKGGVKDNFQGVLQNLRFVFGTSLDAILRNKGCAS
TTSAVITLDNPVNGSSPAIRTNFIGHKTKDLQAVCGFSCDELSNMFMELQGLRTMVQALR
DNVRKVTEENELIARVVQVSPGLCMHNGILHKNREEWTIDSCTECTCQNSATICRKVSCP
LMPCTNATIPDGECCPRCWPSDSPEDGWSPWSEWTPCSATCGNGIQQRGRSCDSLNNRCD
GSSVQTRTCHIQDCDKRFKQDGGWSHWSPWSTCSVTCGSGQITRIRLCNSPTPQMNGKPC
DGVARENKPCQKDPCPINGAWGPWSLWDTCTVTCGGGVQKRGRLCNNPEPQHGGKECQGD
ASESQLCNKQDCPIDGCLSNPCFAGTKCTSFIDGSWKCGACPAGYRGNGVQCSDINECIE
VPDACFVFNGIHRCENTEPGYNCLPCPPRFTGTQPFGQGVEEATENKQVCKPRNPCTDGT
HDCNKNARCNYLGPYGEPTYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCK
KDNCPNLPNSGQEDYDKDGIGDACDNDDDNDGIPDDRDNCQFIYNPEQYDYDRDDVGDRC
DNCPYNHNPDQMDTDSNGEGDACAVDIDGDGILNERDNCPYVYNVDQKDTDRDGVGDQCD
NCPLEHNPEQTDSDSDLIGDKCDSNEDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC
DHDDDNDGIPDEKDNCRLVFNPDQKDTNADGRGDICQDDFDKDNVLDIDDVCPENYEISE
TDFRKFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI
NTERDDDYAGFVFGYQSSSRFYVVMWKQITQTYWDTTPTKAQGYSGLSIKVVNSTTGPGE
HLRNALWHTGNTAGQVRTLWHDPRHTGWKDFTAYRWHLTHRPKTGFIRVVMHEGKKIMAD
SGPVYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDT
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggccctgtatggaggtctcctcctgctgctcatgatcagtgtttatgaagccaaacgc
atctcagaccctggctcggacgatgacggcgtctttgacctctttgagctggtgggcttc
acgcggaaggccgtgtcacgccgggctggagctgtccacctcgtgaagggtccagaccct
tccagtccagcctaccggatcgaggacgctgagcggatcccaccagtgcctgaggagaag
ttccaggacctcctagacgccatcagcgctgaccgaggcttcatcctgctggccaccctg
cgccagggcaagaagacacgtgggaccctgatggccgtggagcgcaaggacggctctgga
catgtcttcagcctggtgtccaacggaagggctggcaccctggacctcagcctcagcgcc
gagggcaagcagcaagtggtctccatggaggacgccctgctggccactggccactggaag
aacatcaccctcttcgtgcaggaggaccgcgcccagctctacgtgggctgcgacaagatg
gagaacgcggagctggacatccccatccaagacatcttcaaccgggacctggccacctct
gcccggctcagggtggccaagggcggtgtgaaggacaacttccagggggttctgcagaat
ctgcgcttcgtgttcgggacctcgctcgacgccatcctccggaacaagggctgtgccagc
accacaagcgcagtcatcaccttggacaaccctgtcaacggctccagccccgccattcgc
accaactttattggacacaaaaccaaggacctgcaggcagtgtgcggcttctcctgcgat
gagctcagcaacatgtttatggagctgcaggggctgcgcaccatggtccaggcgctacgg
gacaatgttcgcaaagtgactgaagagaatgaactcatcgccagggtggtgcaggtcagc
ccggggctctgtatgcacaacggcatcctgcacaagaaccgcgaagagtggaccatcgac
agctgcacggagtgtacatgccagaattctgccaccatttgtcggaaggtgtcctgcccc
ttgatgccatgcaccaatgccaccatccctgatggagagtgctgccctcgatgctggccc
agtgactcccctgaagatggctggtctccatggtccgagtggactccttgttctgccacc
tgtggaaacgggatccagcagaggggtcgcagctgcgacagcctcaacaaccgttgtgat
ggctcctcagtgcagacgcggacttgccacattcaggactgcgacaagcggtttaagcag
gatggaggctggagccactggtccccctggtcgacttgctccgtcacctgcggcagtggc
cagatcaccaggatccggctgtgcaactcgcccactccacagatgaacggcaagccgtgt
gacggcgtggcacgagagaacaagccctgccagaaggacccgtgcccgattaatggcgca
tggggcccctggtcactgtgggatacctgtacagtcacctgcgggggcggcgtccagaag
cgaggccggctctgcaacaacccagagccccagcatggtggcaaggagtgccagggtgat
gcgtcggagagccagctctgcaacaagcaggactgccccatcgacggctgcctctccaac
ccctgctttgcaggaaccaagtgcaccagcttcattgatggctcctggaagtgtggagcc
tgtcctgcgggctaccgaggcaacggggtgcaatgctccgacatcaacgagtgcatagag
gtacctgatgcctgcttcgtcttcaatgggatccaccgatgcgagaacacagagccgggg
tacaactgcctgccctgccccccacggttcaccggaacacagcccttcggccaaggcgtg
gaggaggctacagaaaacaagcaggtttgtaaaccccgcaacccatgcacagatgggaca
catgactgcaacaagaacgcgcgctgcaactacctgggaccttacggcgagcccacgtac
cggtgcgagtgcaaacctggctacgccggaaatggcattatttgtggggaggacacagat
ttggatggctggccaaatgaggacctcgtctgtgttgccaatgctacctaccactgcaaa
aaggataactgccccaaccttccgaactcgggacaggaggattacgacaaagatggcatt
ggcgacgcctgcgataacgacgacgataacgatgggatccccgatgacagggacaactgc
cagttcatctataaccctgagcagtatgactacgaccgtgatgacgtgggtgaccgctgt
gacaactgcccttacaaccacaacccagaccagatggacactgacagcaacggagaaggc
gacgcctgtgccgtggacattgatggcgatggaatcctcaatgagagagacaactgcccc
tatgtgtacaatgtggaccaaaaagacactgatcgggatggagttggagaccaatgtgac
aactgccccctggagcacaacccggagcagacggattcagattctgatctcattggcgac
aagtgtgatagcaatgaagatattgacgaagacggtcaccagaataacctggacaactgc
ccctacgtgcccaacgctaaccaggccgatcacgacaaggacggcaagggggacgcctgt
gaccatgatgacgataacgacggcattccagacgagaaggacaactgcaggctggtcttc
aatcccgaccagaaggatactaatgctgacggtcgtggtgatatctgccaagatgacttt
gacaaggacaatgttctggatatcgatgatgtctgccctgagaattatgagatcagcgaa
actgattttcgcaagttccagatggtacctctcgatcccaagggaacatcgcagattgac
cccaactgggttgtccggcaccaggggaaggagctggttcagactgtcaactgcgatcct
ggccttgcggttgggtttgacgagttcaatgctgttgacttcagtggcaccttcttcatc
aacacagagcgcgatgatgactacgctggctttgtgttcggctaccagtccagcagccgc
ttttacgttgtgatgtggaagcagatcacacagacgtactgggacaccacacccaccaag
gctcagggctactctggcctctccataaaagtagtgaactccaccaccggccccggcgaa
cacctgcgcaatgccctgtggcacacaggaaacaccgctggccaggttcgcactctgtgg
cacgaccctcgccacacaggatggaaggacttcactgcctacagatggcacctgacccac
aggccaaagactggcttcatccgggtggtgatgcacgagggcaagaagatcatggcggac
tctggtcctgtctacgataagacctatgctgggggccgcctgggactctttgtcttctcg
caggagatggtattcttctctgatcttaagtatgaatgtagagatacataa
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