Pleurodeles waltl (Iberian ribbed newt): 138282393
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Entry
138282393 CDS
T10800
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pwl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
138282393
Enzymes [BR:
pwl01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
138282393
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Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
DUF4962
Motif
Other DBs
NCBI-GeneID:
138282393
NCBI-ProteinID:
XP_069076008
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Position
2_2:411517457..411598650
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AA seq
1216 aa
AA seq
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MALMFTGHYFFMVFFIPALSHSEGSVSNYSDWLTFTDDSDQYQKHKLQDVVARAQQQEFS
LHPSLYFDAEDIRIMKQQSRSSHLHLFRAIKSAVSTMLSSPSFFLPPTKHADFSAKWNEI
YGNNLPPLALYCLLCPEDKAAFAFALEYMDRMAGYKDWLVENSPGDEVPLGHSLTGFATA
FDFLYGLLDDSRRHSYLVKIQSVSEEMYEYSKVRSWGKQLLHNHQATNMIALLTGALVTG
LYQESRAHIWKQAVVDVMEKTMFLLNHVVDGSLDEGVAYGSYTSKSITQYVFLAQRHFGM
NNLENNWLKMHFWFYYATLLPGFQRTVGIADSNYNWFYGPESQLVFLDKFVLKNGAGNWL
AQQIRKHRPKDGPMVQSSAQRWSTLHTEFIWYDPSLIPQPPSDYGTAKMHIFPNWGVITY
GAGLPHTLTNTFLSFKSGKLGGRAVYDIVHFQPYSWIDGWRSFNPGHEHPDQNSFTFAPN
GQVFVSEALYGPKYSHLNNVLVFAPSSTSQCNNPWEGQLGECAQWLKWTTDEAGDSAGDI
ITASQHGEMMFVSGEAVSAYPSSMRLKSVYRALVLLNPQTLLVVDHIEKEKDSPLSLVSA
FFHNLDIDFKYVPYKLANRFNGAMMDVWDAHYKMLWLDHHGNSPLARIQEEEQAAEFKKR
WTQFVNVTFPMGSHVTRIAYLFYGPYVNVSNLKFVDDSKYGLRVSLNVNNTEKIISVITD
YNDLSARYNYLGFGGYAKVEDQETITRFGVGTGTVDKIPLNNRYLFQFGFKVNALAGLLM
CVSLAVLAFQWRFYNSFRKLMRLGLILVITLWFIELVDVWSSCSQPICSKESSDSVEKET
DTLKRSQLMGSPFLDLPNVVITSLPGSGADVLKQLFFNSTDFLYIRIPTAYLPIPESELK
IDPFIDACEWSNSDVQDGHFLVMRGWLQSLVQNTKLHLQNIHLHESNKSGFAQHSVVSKE
KKKRYRRKDIVADKRIRLRGSFDKDAEYIKQLRRHLMDYPHSRPVLSLSSGSWTLKLPFF
QEVVGSSLRALFVVRDPRAWIFSMIYNSRPNFYSVNKIAHHLDQMFKAQDSTEKCNSNSG
LAREYESLREELSSSKSNAVSMLAYLWFVNTAAAMRINRQLPKRNYQLVKFEDIVNFPQK
TTESIYAFLGIPVSPATLNQILFASSTNLFYLPYEGEISPIHIDSWKRNMPGEEIRLIEN
ICWTLMDRLGYPKFIN
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggctctgatgtttacaggacattacttcttcatggtatttttcatcccagctctctcc
cactctgaaggatctgtaagcaattattctgactggctgactttcacagatgactcggat
caataccaaaagcataaactgcaagatgttgttgccagagctcagcagcaggagttcagt
cttcatccaagcttgtatttcgatgctgaggacattcgcataatgaaacaacagtcgcgc
agcagccatttgcatttatttagggccatcaagagtgcggtatcaaccatgctgtccagc
ccatctttcttcctgccgccaaccaagcatgctgatttttctgcaaagtggaacgagatt
tatggcaacaacctgcctcccctggcgttgtattgcctcctttgcccagaggataaagcg
gcctttgcctttgcgctggagtacatggacagaatggctggctacaaggactggctggtt
gaaaactcacccggagacgaggtgcccctaggccactccctcactggcttcgccacggct
tttgatttcttgtatggcttactagatgatagtagaagacatagctacttggtgaagata
cagagtgtaagtgaggaaatgtatgaatattcaaaagtgcgttcttggggcaagcagctg
cttcataaccaccaagccactaacatgatagcgctgctcacgggggccctcgtcactggc
ctctaccaggagtcccgagctcacatttggaagcaagctgttgttgatgtaatggaaaag
actatgtttttgctcaatcatgttgttgatggctccttagacgaaggagttgcctatggc
agctatacatcaaaatcaatcacccagtacgttttcttggcacagcgtcattttggtatg
aataacttggaaaataactggctcaaaatgcacttttggttttattatgcaacacttttg
ccaggctttcagaggacggtaggcattgcagactcaaattataattggttctatggtcca
gaaagccagttagtatttctggacaagtttgtgttaaaaaatggagcaggcaactggcta
gcgcagcaaatcagaaagcataggccaaaagatgggcctatggtacaatctagtgctcag
aggtggagcactcttcacacagaattcatatggtacgatccaagcttaatacctcaacct
ccttcagactatggcactgctaagatgcatatatttcccaactggggggtcattacatac
ggagctgggttgccacatactctgactaacacatttctttcatttaaatcaggaaagctt
ggtggccgggctgtctatgatatagtgcattttcaaccgtattcctggattgatggatgg
agaagcttcaatcctggccatgagcacccagaccaaaactcatttacatttgccccaaat
ggtcaggttttcgtttcagaagctctgtatggaccaaaatatagccacttaaataatgta
ctagtatttgccccatcatctaccagtcagtgcaacaacccttgggagggtcaactaggt
gaatgtgcacagtggctgaaatggacaactgacgaggctggagactcagctggagatatc
ataactgctagccaacatggagaaatgatgtttgtaagtggtgaggcagtgtctgcctac
ccatcctccatgagactgaagagtgtttaccgtgctttagtacttttaaatccccagacg
ctgctagtagtggaccatattgagaaagaaaaagactctccccttagtttggtcagtgcc
ttcttccacaatctggatattgattttaagtacgtaccttataagttggcaaatcgattc
aatggggccatgatggatgtatgggatgcccattacaagatgttatggttagatcaccat
ggaaatagccctcttgcgaggatacaagaggaagaacaggctgctgaattcaaaaagcgc
tggacacaatttgtcaatgtgacctttcccatggggagccatgtaactaggattgcctac
ctattctatgggccatatgtcaatgtttccaatctcaagtttgtggatgatagtaaatat
ggactaagggttagcttaaatgtcaacaatacagagaaaataatatcagtaataacagat
tataatgacttgagtgcacgatataattatctgggttttggtggctacgccaaggtggaa
gatcaggaaacaattactagatttggtgtgggcacaggaacagtagataaaatcccttta
aacaatagatacttgttccagtttggatttaaagtaaatgcacttgcaggactcctcatg
tgtgtaagtttggctgtgctggctttccaatggaggttttacaactctttcaggaaactg
atgcgcttgggcctaattcttgttattacactgtggttcattgaattggtggatgtatgg
agctcctgcagtcagcctatctgttcaaaagagagtagtgattcagtggagaaggaaaca
gacacactaaaaagatcacaactaatgggcagtccctttcttgacttaccaaatgttgtg
attacttcattacctggttcgggagcagatgttttaaagcaactctttttcaatagcact
gatttcctctacatcaggattcctacagcctatttgcctatcccagaaagtgaattaaaa
attgacccctttattgatgcttgtgaatggagcaactctgatgttcaagatggtcacttc
cttgtaatgcgaggatggctccaatctcttgtccaaaacaccaagcttcacttacaaaac
attcacctgcatgaatcaaacaagagtgggtttgctcagcattctgtggtaagtaaagag
aagaagaagagatatcgaagaaaagatattgttgctgacaagaggattagattgagaggt
agttttgacaaggatgcagaatatataaaacagttaagaagacaccttatggattatccc
cattcacgacctgtgctcagtttaagcagtgggagttggactttaaaactgccttttttc
caagaagttgttggctcatctttaagggccttgtttgttgtaagagaccctagagcatgg
atcttctccatgatctacaatagcaggcctaacttttatagcgtgaacaaaattgcccat
cacctggatcagatgtttaaagctcaggatagcacagagaaatgcaattccaactcaggt
cttgcccgtgagtatgagtcactgagagaggagctatctagttctaaatcaaatgcagtc
tccatgctggcatatttgtggtttgtgaacactgcagctgccatgagaataaacagacag
ttgccaaaaagaaactaccaactggttaaatttgaagacattgtaaattttccacagaaa
acaacagaaagtatttatgcctttcttggcattcctgtttctccggcgacattaaaccaa
atattgtttgcaagctccacaaacctattctaccttccctatgaaggggagatttcacca
atacatattgacagctggaaaaggaacatgccaggggaggaaattaggctgatagagaat
atctgctggacactaatggatcgcttaggatatccaaagttcatcaattaa
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