Pleurodeles waltl (Iberian ribbed newt): 138283758
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Entry
138283758 CDS
T10800
Symbol
TRAF6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04010
MAPK signaling pathway
pwl04120
Ubiquitin mediated proteolysis
pwl04140
Autophagy - animal
pwl04144
Endocytosis
pwl04620
Toll-like receptor signaling pathway
pwl04621
NOD-like receptor signaling pathway
pwl04622
RIG-I-like receptor signaling pathway
pwl05132
Salmonella infection
pwl05168
Herpes simplex virus 1 infection
Brite
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138283758 (TRAF6)
Membrane trafficking [BR:
pwl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
138283758 (TRAF6)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
138283758 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138283758
NCBI-ProteinID:
XP_069077921
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Position
3_1:71226921..71347919
Genome browser
AA seq
547 aa
AA seq
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MSLLQSGSEVCGYDDACCGAMASACSAKEDSLDPGSTHGVGNQSGSHIEDIQGYDEDFDP
PLESKYECPICLMALREPVQTPCGHRFCKECILKSIRDAGHKCPVDNELLLEKFLFPDNF
AKREILSLTVKCPNKGCLQKMELRHLEAHQALCEYACVECLQCQQSLQKSHLEGHVLLEC
PRRQVLCENCHMSIAYEEKWEHDQNCPLAYVKCEYCTIDLIREQIPGHFATECPLAPIEC
VFSVFGCTEKMQRNREARHMQDFMALHMRMMAKTLRSAGFSSNSTTPVSLPLDPGLSVIS
PIHPPALSSPRDCMPDVQNFRETIQQLESRLVRQDHQIRELIAKMETQSTQVADLKRSLF
SMKDRVEELEAQQCNGIYIWRIENFGMHLKAQEEERPVVIHSPGFYTGKPGYKLCLRLHI
QLPNVQRCANYISLFVHAMQGEYDSYLPWPFQGTIRLSILDQSDGPLRQNLEEVMDTKPD
LLAFQRPTMYRNPKGFGYVTFMHLQVLKQRAYVKDDVLLVRCEVMTRFDMNSLRREGFQP
RSTDSAL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcctacaatcaggtagcgaagtgtgtggctacgacgacgcttgttgcggtgcc
atggccagtgcatgcagtgcaaaagaggacagtttggatccaggctccacacacggagtg
ggaaaccagtctggctcccacatagaggacattcaaggctatgatgaggactttgatcct
cccttggagagcaagtatgagtgcccaatctgtctgatggcccttcgagagccggtgcag
actccatgtggacaccgcttttgcaaagaatgtatcttgaaatccattagagatgctgga
cataagtgccctgtggacaacgagctacttttggagaaatttctcttcccagacaacttt
gccaaacgggaaatcttgtcactgacagtaaagtgtcccaacaaaggctgtctccagaag
atggaactgaggcatctagaggcacatcaagcactttgtgagtatgcctgcgtggaatgc
ctacagtgccagcagtccttacagaagtctcaccttgaaggccatgtcttactcgagtgt
ccaagacggcaggttctctgcgaaaactgtcacatgagcatagcttacgaagaaaagtgg
gaacacgaccagaactgcccactggcctatgtgaaatgtgaatattgcaccattgatctc
atccgagaacagataccaggccattttgctacagagtgccctctcgcccccattgagtgt
gtattcagtgtgtttggatgcaccgaaaagatgcaacggaatagagaggcacgccatatg
caagattttatggccctccacatgcgaatgatggcaaagacactgcgtagtgccggcttc
tcaagcaactccacaacaccagtttctctgccactagacccggggctttctgtcataagc
ccaatccacccccctgccttgtcctcgccacgagactgcatgcctgacgtgcagaacttc
cgggaaaccattcagcaactggaaagccgactggtgaggcaggaccaccagatcagagag
ttgattgccaaaatggagacccagagtacgcaagtggcagacctcaaacggtctctcttc
agcatgaaggacagggtggaggagcttgaggcacagcaatgcaatggcatttatatctgg
agaattgagaattttggtatgcatctgaaagctcaggaggaagagcggccagtggtcatc
cacagtcctggattctacactggaaaacctggctacaaactctgcttacgcctccacatt
cagttgcctaatgtccagcgctgtgctaattacatatcactttttgtgcatgccatgcaa
ggggaatacgatagctatctcccttggccattccagggcactatacgcttatccattctt
gatcagtcagatggaccattaaggcagaacctggaagaagtgatggacaccaaacctgac
cttctggcattccagcgcccaaccatgtatcggaacccaaagggttttggctacgtgact
ttcatgcacctgcaagtgcttaagcaaagggcctacgtaaaagatgatgttttactagtg
cgttgcgaggtaatgactcgcttcgatatgaacagtctccggagagaaggctttcagccg
cgcagcactgatagtgctctgtag
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