Pleurodeles waltl (Iberian ribbed newt): 138285096
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Entry
138285096 CDS
T10800
Symbol
GLI2
Name
(RefSeq) zinc finger protein GLI2 isoform X1
KO
K16798
zinc finger protein GLI2
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
138285096 (GLI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138285096 (GLI2)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
138285096 (GLI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
138285096
NCBI-ProteinID:
XP_069080723
LinkDB
All DBs
Position
3_1:1293029367..1294086669
Genome browser
AA seq
1529 aa
AA seq
DB search
MSEMATSVPVSTCEKKEVKGSSLQDNVFIDAGKKVSHLSVAATRGVAPHLFPAFHVPFPI
DMRHQEGRYHYEPHAVHAIHGPSTLTGSPVISDISLIRLSPHAAATGESPFGHTHHYVNP
HMEHYLRSLHSSPTLSMISAARGLSPAEVAHEHFKERGFFGLPPPPPGANPADYYHQMAL
MAGHPNPYGELLLQSGGAASMAHLHDYLNPVDMSRYSSPRLTPRLSRKRALSISPLSDAS
LDLQTMIRTSPNSLVAYINNSRSSSAASGSYGHLSAGALSPAFSFPHPINPMAYQHLLNQ
QRSLSAAFGHTPPLLQPSPTFASRQHMAVIAANPGPAPLSNSSQLESNQSKPSSESAVSS
TVNTAINKRSKVKTEVESQRPISPCTQEHLTELREDLDKDECKQEPEVIYETDCHWDSCE
KEFDTQEQLVHHINNDHIHGEKKEFVCRWQECSREQKPFKAQYMLVVHMRRHTGEKPHKC
TFEGCYKAYSRLENLKTHLRSHTGEKPYVCEHETCNKAFSNASDRAKHQNRTHSNEKPYV
CKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRNEGHPRTNPPKENGDNEASAKHSGK
LSGEERDTHSTSSSLEDCFQVKTIKTENTMMYQSSPGGQSSCSSEPSPLGSTNNNDSGIE
LNMHSGGSLGDLTALDDNTPVVDSTVSSGTSTVSLQQRKHMTTMQRLEHLKKEKLKTVRD
SCLWASSAPQIRNTKLPPIPGNGYFPEGIGGSTTLASPRIMELTANEEVMMNLLNDRRDS
ATSTISSAYTNSRRSSGISPYFSSRRSSEVSQCGGRPNNISSADSYDPISTDMSRRSSDA
SQCSGMPGILNLTPAQQYRLKAKYAAATGGAPPTPLPNMDKMNLRNKMSLFDGQEFTMPP
FRHPPAPRRCSDNGTGVYGMPTFPQELAGNGTRRASDPIRRPPIDPLSLPRVQRFNSMNN
MNPSYPGHAMDRRNFTLQNYTHSESSLNRHTYSPQPPSISENVTMEAVSSEAAGNIVEED
IMLPDDVVQYIKSQNTESNGGNSAAYYNNNMQNCQGNVKLQNHNLNSQRRMAVTDANLNV
TRPLTEECQGDFSTSSNIHKNNMPVQWNEVSSGTVDVMSNLMKQQLPQGNLAVIQQKQIF
GQYQNFNQQLLEASQNPMNVSQQNVLQRNAGMSGQRVHLMQQREQQMSQCPNRNMNPDFM
LCHGYNATLQMHNPGTVRGDQNQQTPACNDMSAKSNQHAHPQQMETVPNSSFMGDSNREC
IVPNEGMQRLTHQNYSSQSCHMNSSQNQEAFQQHGLLIALTQQNVIDTQHNMVGSERQTY
SSGVQPRPPVGPSPMNRHRGLRAAQLGYLGSTPNVDNVNAAQQTAEATPKRTNNMEVEHP
QQYVNSEQENSLMFYSGQIHMYEHNGNFDSPVGGTGGQLQVSSKVKPDAMPSPGVNQVSS
TVDSQGLEQPATIDFDTMMDDGDHSSLMSGTLSPGLLQNLSQNSSRLTTPRNSLTLPPIS
AGISNMAIGDMSSMLSTLAEESKFLNLIS
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagatggcaacatcggttcctgtgagtacctgtgagaagaaagaagtcaaagga
agcagtctacaggacaatgtgttcattgatgctgggaagaaggtgtcccacttatctgta
gcagcaacacgaggagtggctcctcatctttttcctgcattccatgtgcccttcccgatc
gacatgcgtcaccaggaagggagataccattacgagccgcatgccgtccacgccattcat
ggaccttcaacattgactggtagccccgttatctcggatatctcgcttatccgtctctct
ccccacgcagctgccactggcgaatcaccatttggccacacccaccattacgtgaacccg
cacatggagcactacctgcgctctttgcacagcagccccaccctctcaatgatctccgct
gcaagaggccttagcccagctgaagttgcccatgagcactttaaggaacgtggttttttc
ggacttccgcccccgccaccaggagccaaccctgcagactactatcaccagatggccctc
atggctggccatccaaatccctatggggagctcctgttgcagagtggaggggcagccagc
atggcccaccttcacgattacctcaaccccgtggacatgtcccgatattccagcccgagg
ctaacacctcggctgagtaggaagcgggccctgtccatctctccactttcggatgccagc
ttagacctgcagacaatgatccggacctcccccaactctctggtggcatacatcaacaac
tccaggagcagctctgccgccagtggctcctatgggcacttatccgcaggggcactcagc
cctgctttcagcttccctcaccctatcaaccctatggcgtatcaacatctcctgaaccaa
cagcgtagcctgagtgcggcatttgggcacacccctcctctcctccagccttcgcctaca
ttcgcatcccgccagcacatggcagtcatcgcagccaatccgggtcctgcgccgctcagc
aacagcagtcagctggaatctaatcagagcaagcctagcagtgaatctgctgtcagcagc
acggtgaacaccgctattaataagcgcagcaaagtcaagactgaagtggaaagtcagcgc
cccatctcaccgtgcacgcaggagcacctgacagaactgcgagaggatctggataaagat
gaatgcaagcaggagccggaggttatttatgagacggactgtcactgggacagctgcgaa
aaggagtttgacactcaggagcaactggtgcaccatatcaataacgaccacatccatggg
gaaaagaaggagtttgtctgtcgttggcaggagtgctcgagggagcagaaaccgttcaag
gcccagtacatgctggtggtgcacatgaggaggcacacgggggaaaagccgcacaagtgc
acgttcgagggctgctacaaggcctactctaggttggaaaacttgaagacgcatttgagg
tcccacacgggtgaaaagccatatgtgtgtgagcacgagacctgcaacaaagcgttctct
aatgcctccgaccgggccaagcaccagaaccggactcactccaacgagaaaccatatgtg
tgcaaaatccctggctgcacgaagagatacacggaccccagctcgctcaggaaacacgtc
aagaccgtccacggacccgaagcgcacgtcacaaaaaagcagcgtaacgaaggtcacccg
cgcacaaacccaccaaaggaaaacggggacaacgaggcaagtgccaagcatagcggcaaa
ctttccggagaggagcgtgacacccacagcacgagcagcagcctggaggactgtttccag
gtcaagacaataaaaactgagaacaccatgatgtatcaatccagccctggtggccagtcg
tcatgcagcagtgaaccatcgcctcttggcagcaccaacaacaatgatagtggaatagaa
ctcaacatgcacagtgggggaagtctgggagatcttacagccttggatgacaatactcct
gtggtggactcaacagtctcatctggtacttcgactgtcagcctccagcaaagaaaacac
atgacaaccatgcaaagacttgagcatcttaagaaagagaaactgaagactgttagggat
tcctgtttatgggcgagttcagctccacaaatcagaaacaccaagctgccacccatacca
ggaaatggttattttccagaaggcattggtggttccactacactagcttctccaagaatt
atggagctgactgccaatgaggaggtgatgatgaacctgctaaacgatcgtcgcgatagt
gcaacaagtacaataagctcggcctacacaaacagccgcagatcatcaggcatttcaccc
tatttctcaagtcgtcgctccagtgaggtttctcagtgtgggggccgtccaaacaatata
agctctgctgactcctatgaccccatctcaactgatatgtcacgtcgttccagtgatgcc
agccagtgcagtggtatgcctggtattctcaacctaacacctgctcaacagtaccggctt
aaggcaaaatatgctgctgccactggtggtgctccacccacacccctacctaacatggac
aagatgaatttacgaaacaagatgtctctgtttgatgggcaagagtttactatgccccca
tttcgtcatccaccagctcctagacgctgcagtgacaatggaactggagtgtatggcatg
ccaacgtttcctcaggagttggctggcaacggtacaagacgcgcaagtgatcccattaga
agacctcctattgacccactgtctctaccaagagtgcagcgatttaacagcatgaacaac
atgaatccttcttacccaggtcatgccatggatagaaggaatttcaccctgcagaactac
acacattctgagagcagtctcaataggcatacctattccccacagccaccgagcattagt
gagaatgtcaccatggaagcagtgtctagcgaggcagctggcaacatagtggaggaggat
attatgctgccagatgatgtggtgcagtacataaagtctcaaaacactgaatctaatggg
ggaaatagtgctgcatattacaacaacaacatgcaaaattgccaagggaatgtgaaactg
caaaatcataacctcaacagccagcgtaggatggcagtcacagatgcaaatttgaatgtt
actaggcccttaactgaagagtgccaaggagattttagcacctcttccaatatacataaa
aataacatgccagtccagtggaatgaagttagctcaggtacagtggatgtcatgtccaac
ctcatgaagcagcagttgccgcaaggaaacttagctgttattcagcagaagcagattttt
ggtcaataccagaactttaaccagcaactcctagaggcaagccaaaatcctatgaatgta
tctcagcaaaatgtgttgcagagaaatgcaggtatgagtggacagagggtgcatttgatg
cagcaaagagaacagcagatgagccagtgtcctaatagaaatatgaatccagactttatg
ctatgtcacggatacaacgcaacactgcaaatgcataatccaggcacagtcaggggagat
caaaaccaacaaaccccagcgtgtaatgacatgagtgcaaagtccaatcagcatgcccat
cctcaacaaatggagaccgttccaaattcctcattcatgggggatagcaatagagaatgc
atagtaccaaacgaagggatgcaaagacttacacatcagaactactcatctcagtcatgc
catatgaactcttcccaaaaccaggaggccttccagcaacatggtttattaatagccttg
actcaacaaaatgttattgacactcaacataatatggtgggttcagagaggcaaacatat
tcttcaggagttcaaccccgacctcctgttggtccaagtcccatgaacaggcatcgaggg
ttgcgcgctgcacagcttgggtatttgggaagtacgccaaatgtagataatgttaatgct
gcccagcagactgctgaggctacccccaaaagaacaaataacatggaagtggaacatcct
cagcagtatgttaacagtgaacaggaaaacagcttgatgttttactccggccaaatccac
atgtatgagcacaatggaaactttgacagccctgtgggcggcactggcgggcagctgcag
gtttcttcgaaagtgaagccagatgcgatgccatcaccaggagtcaatcaggtctcaagc
acagtggactctcaaggcttggagcagcccgccacaatcgattttgataccatgatggat
gacggcgaccactcaagtctaatgtctgggactctgagccctggcctcctgcagaaccta
tcccagaactcctctcgacttacaactccacgtaactcgctgaccctgccgcccatctct
gctggcattagtaatatggcgataggggatatgagctccatgctatcgactttggccgaa
gagagcaaatttcttaacttgatatcttaa
DBGET
integrated database retrieval system
