Pleurodeles waltl (Iberian ribbed newt): 138285779
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Entry
138285779 CDS
T10800
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138285779 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwl03019
]
138285779 (SMG6)
03032 DNA replication proteins [BR:
pwl03032
]
138285779 (SMG6)
Messenger RNA biogenesis [BR:
pwl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138285779 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
138285779 (SMG6)
DNA replication proteins [BR:
pwl03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
138285779 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
Motif
Other DBs
NCBI-GeneID:
138285779
NCBI-ProteinID:
XP_069082252
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All DBs
Position
3_1:complement(1920977329..1921867668)
Genome browser
AA seq
1402 aa
AA seq
DB search
MAQELQRVRISAEELRDILAASGRDNTMEMKQARQRKDNRRPDMEIYKPGLSRLRNKQNL
IKLETSRSQGNCTEESRNDVVFSQTAENESPQQNGLQCESGETEGLSGPSCKEDSSNPVD
LHSKFSKRSKKPDKQIFQPSRRMQVNEPSTESADEELAKSTGKLRITQESLTETNRVVGS
KNALTQLSESIQPLLVEKAKKCGKGSDDMRPGKLTLDEKECGPTKRYSHSDKRRTRHRFC
STSSAGSSNSSGEGVVQPDGSRRRQDRGKVSRERTRPKKQVSTSSTDSLDEDRLHSAESP
GKEAHESDWSLGQRADSERRTSGKENRGSHQGSFQGRTSNTHLPVSLGSREDKGRKKEPK
ILQRSAPGSRRTEGKDPNANSRGRGRGILVLPANTSVTTRGSPESSNSELKLLFGISGNS
KGIRGRGRASGNRRLWDPNNPEQKPALKKQTSQLHFLDTDDEAPPSSQGDSLSAYARPAQ
ASYYKFQNSDNPYYYPRPGIPGSQYPYAGYSMPYSGDLHNGVYPSSCYPGYTASSEHYLP
ASFAGSHLSPEEMEQQVRTLQQQELRQLLRVADNQEVQLSNLLSRDRISPEGLEKMTLLR
TELLQLYERCLLTDIEFSDSQNIDQILWKNAFYQVIEKFRQILKDPAAENGEVIRKKLLQ
LLDEGSTFFDSLLQKLQLTYQFKLEEYMDGTAIRSKPLRKMVKFALISAQRCMICQGDIS
RYREQANDTTNYGKARSWYLKAHHIAPKNGRPYNQLALLAIYTRRKLDAVYYYMRSLAAS
NPILTAKESLMSLFEETKRKSEQIELRKRQELELSPCRRVNNRKTTCGFSGEDTTRLEIW
IHPSNPHSSKGRESGQDSEEDDDLLAISPGDLNKRFLLSFLHAHGKLFTRVGMETFPAVA
EKVLREFHALIQHSPSPIGCVRMLQLMAINMFAVHNSQLKECLSEDCRSVIQEQATCLGL
SMFSLLVKRSTDLLKELSRDRPRVEEEEEQEDEVDDIKVSSFQADLKELLPSVKVWSDWM
LGYPATWNPPPTSLVLSKEASTDVWATLADFCNTLTMVNQSEVPLYKDPDEDLSLLLLDE
DRLLSGFVPLLAAPQDPCYVEKSSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKY
VSVAHVPDAMGKEMGSQEGKQLEDQDDDVVIEEFEDDSEGSGEEYDFKALRAKKQVLSKK
VAEQQKRRDKIQAVLEDHMRQIELEIRPLFLVPDTNGFIDHLPSLKQLLDCKHYILVVPL
IVINELDGLAKGQETDYRAAGHARLLQEKARKAVEFLEQRFEARDSYLRALTSRGNELES
IAFRSEDTTGQKGNNDDLILSCCLHYCQDRAKDFMPAKKDDPIRLQREVVLLTDDRNLRV
KALTRHVPVRDIPAFLKWVKVG
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggaactacagcgagtccgtatctctgccgaagagctaagggacatcctggcg
gcctctgggcgagataatacaatggagatgaagcaggctaggcagcgaaaggacaaccgg
cgtccagacatggaaatatacaaacctggactctcccgcctgagaaacaaacaaaacctg
attaaactagaaacttccagaagccaggggaattgtactgaggaatccaggaatgatgtt
gtcttcagccaaactgcagagaacgagtctcctcagcagaatggcctccagtgtgaaagt
ggtgagacagagggattatctggaccatcatgcaaagaagattcatccaacccagttgac
ctacactctaagttcagcaaaagatcgaagaagcctgacaagcagatttttcagcctagc
aggcgtatgcaggtgaatgagccctcaacggagtctgctgatgaggaactcgccaagagc
actggcaagctgagaatcacacaggagtcattgacagagacaaatcgtgttgtaggcagc
aaaaatgcactcactcagctaagtgaaagtattcagcctctattggttgaaaaggcaaag
aaatgtggaaagggcagtgatgacatgaggcctggaaaactaacactggatgagaaagag
tgtgggcctaccaagcgttactcccactcagacaagcgccggacccggcatagattttgc
agtaccagctctgctggtagcagcaacagcagtggtgagggagtagtgcaacctgatggt
agcagaagacgacaagaccgggggaaggtgagccgagagaggacccgtcccaaaaaacag
gtatctacctcctccactgactcactggatgaggaccgattgcactcagccgaatcacct
ggcaaagaggcacatgagtcagactggagcttgggccagagagcagacagcgagaggaga
acttctggcaaagagaaccgaggcagtcaccaagggtcattccaaggcaggacctcgaac
acccaccttcctgtgagccttggttctcgagaggacaaggggaggaaaaaggaaccaaag
attctccaacgatcagctcctggtagcagaagaactgaagggaaagaccctaatgcaaat
tcccgagggagaggccgaggaatccttgtcctccctgctaacaccagcgtaactacaaga
ggctctcctgaatctagcaattctgagctgaagcttttatttggtataagtggtaacagc
aaaggtattagaggaagaggtcgtgccagtggaaatcgccgcctctgggacccaaacaac
ccagagcaaaaacctgcactaaagaaacagacctcacagttgcactttttagacactgat
gatgaggcccctccctcttcacagggagattcactctcagcttatgcgcgacctgctcaa
gcttcatactataagtttcagaattctgacaacccttactattaccccaggccaggcatc
ccaggctctcaatacccctatgctgggtactccatgccgtactctggggacctccataac
ggtgtgtaccccagttcgtgttatccagggtacacagcctcttctgaacattacctgcct
gcttcctttgctggcagccatttaagccctgaggagatggaacagcaggttcggactctg
cagcagcaagagttgcggcaactactgcgtgtggcagacaatcaggaggtacagctaagc
aacctgctatctagggatcgaatcagcccagagggtctggaaaagatgactctgctcagg
acagaactcctgcagctgtacgagcgatgcctgctcactgacattgaattctccgacagt
caaaacatagatcaaattttatggaagaacgccttttatcaggtgattgaaaagtttcgt
cagatcctcaaggaccccgcagcagagaatggcgaagtcattcgaaaaaaactcctgcag
ctgttggacgagggctctacgttttttgacagcttgcttcagaagttgcagttgacttac
cagttcaagctagaagaatatatggacggcacagccattcgcagcaaacctttgcgcaaa
atggtgaagtttgccctgatcagtgctcagaggtgcatgatctgtcagggagacatttcc
aggtaccgagagcaagccaatgacaccacaaattacggcaaagcacgcagttggtactta
aaggcccatcacattgccccaaagaatgggcgcccctacaatcaactcgcccttttggcc
atctacacgaggaggaagctagatgcagtgtattattacatgcgcagtttggctgccagt
aaccccatcctgactgccaaggagagcctgatgagcctgtttgaggaaaccaagcgcaag
tctgagcagatcgagttgagaaagaggcaagagctggagctcagcccatgtcgtcgggtc
aataacaggaaaaccacatgtggattttctggagaagacactactcgcctggagatctgg
atccatccttccaatcctcattcctcaaagggccgggagtcaggccaggattctgaagag
gatgatgacctgctggctatcagccctggcgatctgaacaagaggttcctgctcagtttc
ctgcatgcccatgggaagctcttcaccagggtcgggatggaaacgtttccggcagtagct
gaaaaagttctgagagagttccatgctttgatacagcacagcccatcgcccatcggatgc
gtccgcatgctgcagctcatggccattaacatgtttgctgtgcacaactcccagttgaaa
gagtgcctctctgaagattgccgctcggtgatccaggaacaagccacatgtttggggctc
tccatgttctccctgctggtgaagaggtcaactgacttgctcaaagagctgtcacgagat
cgtcctcgagtagaggaagaggaggagcaggaagatgaggtagacgacatcaaggtctca
tcgtttcaggcagatttgaaggagctgctacccagtgtgaaggtgtggtcagattggatg
cttggctaccctgctacctggaacccaccccctacctcccttgtgctctccaaggaggcc
tccactgacgtgtgggcgacgctggccgatttctgtaacaccctgaccatggtgaaccag
tctgaggtgcccctctacaaggacccggacgaggacctgagcctgctgctcttggacgag
gaccggctcctctctggctttgtgccgcttctggctgccccccaggacccctgctacgtg
gagaagagctcggataaggttattgcggcggactgcaagagggtcaccgtcctgaagtat
ttcctggaagcgctgtgtggacaagaagaacctctgctggcattcaagggtggaaaatat
gtgtcagtggcacacgtcccagacgctatgggaaaggaaatgggaagccaagagggaaag
caactggaagatcaggatgacgatgttgtaattgaagagtttgaagacgattcagagggc
agcggggaagagtatgacttcaaggcactgagagccaagaaacaggtcctgtccaagaag
gttgcggaacaacaaaaacggcgagacaagattcaggctgtgctggaggatcacatgaga
caaatagagcttgaaattcgcccactctttcttgttcctgacaccaatggcttcatcgac
catctgcccagccttaagcagctgctggattgcaaacactacattctggttgtgcccctg
attgtgattaatgaattggatggattggcaaaaggacaagagacagattaccgtgctgca
ggccatgcccgtctgctacaggagaaggcaagaaaggctgtggaatttctggagcagcgg
tttgaggccagggactcctacctgagagcactgactagccgtggcaatgagcttgagtcc
atcgcatttcgcagtgaggacaccactggacagaagggaaacaatgatgatctgattctc
tcctgctgcctgcactactgccaggatcgggccaaagacttcatgccggctaagaaagat
gaccccatccgcctgcagagagaggtagtactgctgactgatgaccgaaaccttcgcgtg
aaggctctgactcgccacgtccctgttcgtgatatccctgcctttctcaagtgggtcaaa
gtgggatga
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integrated database retrieval system
