Pleurodeles waltl (Iberian ribbed newt): 138288125
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Entry
138288125 CDS
T10800
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5
KO
K09446
interferon regulatory factor 5
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
138288125 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138288125 (IRF5)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
138288125 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
138288125
NCBI-ProteinID:
XP_069085486
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All DBs
Position
4_1:complement(764958333..765078830)
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AA seq
508 aa
AA seq
DB search
MDVRTPASMNCHPRRIRLKPWLIAQVDSGQYMGLQWENQERKLFRIPWRHATRHIPIQDD
ENTIFKAWAKETGKYQEGVDEPDPAKWKANLRCALNKSREFKLLYDGTKETPMQPFKIYE
VCDIQQTNGDSFAGDEYICGQEDDEELQQMLPNLRLIDNPPPYTYTKQEVPFGLSCCNGP
FPTETLPSNMTSVAPTTAPPLNLAGDKHPSQNLVGPARHIPLTELIPMGPIESIPDVNIP
LVNAPQFIPDLLISPHMLPLTDLEIKFLYRGRAAGSLTVSNPHGCRLFYSNLEPTPDQVE
LFGPMTLEQVRFPSTDNIPNDKQRFYTNHLLDVMDRGLILELQGQDIYAIRLCQCKVFWS
GPCAEQRLGPNPIERETRTKLFSLESFLNELIMCQKGQTSITPPYEIFFCFGEDWPDKKP
KEKKLITVQVIPVAARILLEIFSGEANSSIDSIRLQISHPDMKDKMVEQFKELHQLWQNQ
QAIHAAAAAPGLETVQGQETGAGPWSMQ
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcaggactccggcttcaatgaactgccacccccggcggatccgactgaagccc
tggctcattgcccaggtggacagcgggcagtacatgggcctccagtgggaaaaccaggaa
cgcaaactcttccggatcccctggcgccatgccacgaggcacatccccatccaggatgat
gaaaacaccatcttcaaggcctgggccaaggagactggcaagtaccaggagggtgtggat
gagccagaccctgccaagtggaaagccaacctgcgttgcgccttaaacaaaagccgtgaa
ttcaagctcctgtacgatggtactaaggagacacctatgcagcccttcaaaatctacgaa
gtttgcgatatccagcagaccaatggagactccttcgctggagatgagtacatctgcggc
caagaagatgatgaagagctccagcagatgcttccgaacctgcgtttaattgataatccc
cctccatacacttatacgaagcaggaggtgccgtttggactctcatgttgtaatggaccc
tttcctacagagacccttccttccaacatgacttctgtggcccccaccacggcaccccca
cttaaccttgcaggggacaaacatccatcgcagaacctcgttggaccagccagacacatt
ccattgacagaactcatcccaatgggtcccattgagagcattccagatgtcaacatacca
ctggtcaacgcaccccagttcatcccagacctgctcatcagtccacatatgcttccactt
accgacctggaaatcaagttcctgtaccgggggcgggcagcaggttctctgacagtcagt
aatcctcacggctgccgtctcttctacagtaacctggagcccactccggaccaggtagag
ctttttgggcccatgacactggagcaggtgcggttccctagcacggacaacattccaaac
gacaagcagcgcttctacaccaaccacctgctggacgtcatggatcgtggcctcatcctg
gaactccagggtcaagatatatatgccatccggctgtgccaatgcaaggtgttctggtct
gggccctgtgcagagcaacgtctgggccccaacccaattgagagagagacaaggactaag
ctcttcagcttggagagctttctcaatgagctcatcatgtgccaaaaggggcagaccagc
atcacacctccttacgagatcttcttctgttttggggaggattggcctgataagaaacct
aaagagaagaaactaatcactgtccaggtaattcctgtggcggcccgtattctgctagag
atattctccggagaagccaactcgtccattgacagcatccgactgcagatctcccacccg
gacatgaaggacaagatggtggagcagttcaaagagctccaccagctctggcaaaaccag
caggcaatacatgctgctgcagccgctcccgggctggagaccgtgcaggggcaagagaca
ggggctgggccttggtccatgcaatga
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