Pleurodeles waltl (Iberian ribbed newt): 138293059
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Entry
138293059 CDS
T10800
Symbol
DHX9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pwl03041
]
138293059 (DHX9)
03012 Translation factors [BR:
pwl03012
]
138293059 (DHX9)
Enzymes [BR:
pwl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
138293059 (DHX9)
5.6.2.6 RNA 3'-5' helicase
138293059 (DHX9)
Spliceosome [BR:
pwl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138293059 (DHX9)
Translation factors [BR:
pwl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
138293059 (DHX9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
Dicer_dimer
HA2_C
ResIII
AAA_14
AAA_19
nSTAND3
Motif
Other DBs
NCBI-GeneID:
138293059
NCBI-ProteinID:
XP_069088151
LinkDB
All DBs
Position
4_2:complement(531596862..531823378)
Genome browser
AA seq
1250 aa
AA seq
DB search
MGDVKNFLYAWCGKKKVTPSYEIRTAGNKNRQKFSCEVRVDGFNYTGMGNSTSKKDAQSN
AARDFVNYLVRIGEVKSSEVPTFVVGEGQGLGVPAGGFEGSSGPLPPHLAIKKETGELPV
GSGFGGGASWERGANLKDYYSKKEEQENEATLESEEVDLNAGLHGNWTLDNAKARLNQFF
QKEKTQAEYKYTQVGPDHNRSFIAEMTLYVKQLGRRITAREHGSNKKLAAQSCALSIVRQ
LYHLNVIEAFSGQTKKKEGELIEPYMVNLSGDVEKQLQMVMQELGVELMPPPEDPAYPVS
LVLGKLVHFEPSQRQTNCGVVPWSPPQENWNPWTSSNIDEGPLAYATQEQISADLRSDLM
FQLEKDQNLQQTLRERESLPVKQFEQPILDAIHNNPVIIIRGATGCGKTTQVPQYILDEF
ILNGRAAECNIVVTQPRRISAVSVAERVSYERGEEPGKSCGYSVRFESVLPRPHASIMFC
TVGVLLRKLEAGIRGISHVIVDEIHERDINTDFLLVVLRDVIQTYPDIRVILMSATIDTT
MFCEYFFNCPLIEVYGRTFPVEEYFLEDCIQMTQFIPPPRDKKKKDKDDDARDDEETNCN
LICEGDYGPETKRSMAQLSEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQRH
LEMNPHFSYNRYRILPLHSQIPREDQRRVFEPVPEGIIKVILSTNIAETSITINDVVYVI
DSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRAGFCFHLCSQARFERLETHL
TPEIFRTPLHEVALSIKLLRLGGIGNFLSKAIEPPPLDAVIEAEHTLRDLDALDTNDELT
PLGRILAKLPIEPRLGKMMIMGCILYVGDAVCTISAATCFPEPFVSDGKRLGYVHRNFSG
NRFSDHVALLSVFQAWDDARMGGEDAEMRFCEHKRLNMATLRMTWEAKVQLKDILVNAGF
PEECLMTQIFNNSGPDNKLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSVNC
PFTSQDPKYPSPFFVFGEKIRTRAISAKSMTMVSPLQLLLFASKKVMSDGEMVVLDDWIK
LLIPHDAAAYITALRATMEALVVEVTKDPEILSQLDPGNEQMLNMIRLISRPSTAGINLM
MGNARFGDGPRPPKMARLDNGDSRGGGFRGRGGNYSGGFNSGDALGGSGSYRGGGRGFGA
GGSRGGYRGGYQSGGSGGFGGGRGGFGGGYQSRGNRGFGGGFRGQGRGGF
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgtcaagaacttcctttacgcctggtgcggcaaaaagaaagtgactcccagc
tatgaaatccgaactgcaggaaacaagaaccgccaaaagttcagctgcgaggtgcgtgtg
gatggctttaattacactggcatgggcaattctactagcaaaaaagatgcacagagcaat
gcagcgagagactttgtcaactatctggtgcgcattggtgaagttaaaagttcagaggtc
ccgacatttgtggttggggaggggcaaggacttggtgttcctgctggggggtttgaagga
tcttcagggcctcttccaccgcacttggcaatcaaaaaggaaaccggtgagctaccagtt
ggctctggattcggaggaggtgcttcttgggaacgtggtgccaacctgaaggattactac
agcaagaaggaagagcaggagaatgaggcgactctggagtcagaagaggtagatttgaat
gctggtctccatggcaactggactcttgataacgccaaggctcgtctgaatcagttcttc
cagaaggagaagacgcaggctgaatataaatacactcaagtgggccctgaccacaacagg
agttttattgctgaaatgaccctttacgtgaagcagttgggacgaagaattactgctcgt
gagcacggatcaaacaagaaactggcagctcagtcgtgtgctctctcaatcgttcgccag
ctataccatttgaatgtgattgaggccttctctggacagaccaagaagaaagaaggagaa
ctgattgagccttacatggtgaacttgagtggggatgttgaaaagcaattgcagatggtg
atgcaggagctgggtgttgaactgatgccgccgcctgaagatcctgcatatccggtttca
cttgtattaggaaaattagttcattttgagccctcgcaaaggcagacaaattgtggtgtg
gtgccatggtccccaccacaggagaactggaacccctggaccagcagcaatatcgatgaa
ggcccattggcatacgcaactcaagagcagatcagtgctgacctgaggagtgacctgatg
tttcagctagagaaagatcagaacttgcaacagactctgcgtgaacgtgaatctcttcct
gtaaagcagtttgaacaaccgatcttggatgcaatccataacaatcctgtgatcatcatc
cgtggggcaacaggttgtggtaagaccactcaggtaccacagtatatattggacgagttc
atcttgaatggccgggctgctgagtgcaacattgttgtcacccagcccagaaggatcagt
gctgtgtcagtagcagagagagtttcctacgaacggggagaggaaccaggaaaaagctgt
ggatatagtgtgcggtttgagtccgttcttcctcgtccacatgccagcattatgttttgc
actgtaggagtccttctgaggaagctagaagctggaatccgaggaatcagtcatgtgata
gtggatgagatccacgaaagggatataaatactgatttccttttggtggtcttgcgagac
gttatccagacctaccctgacatcagagtcatcctcatgtctgctaccatcgacaccacg
atgttctgtgaatatttcttcaactgtccactcatcgaggtgtatggcagaaccttccca
gtagaagaatattttttggaggattgcatccaaatgacccagtttataccaccacccagg
gataaaaagaagaaggataaagatgatgatgccagagatgatgaagagaccaactgtaat
ctaatttgtgaaggagactatggccctgagacaaagcgttcaatggcacagctaagcgag
aaggagaccccgtttgagctcattgaggctttgctgaaatacatagaaactcttaatgtt
cctggagcagttcttgtcttcttgccaggatggaaccttatttacaccatgcagaggcac
ctggaaatgaatcctcacttttcatataatcgatatcggatattgccactgcattcccaa
atccctcgcgaagatcaacgcagagtgtttgaacctgtgcctgaggggatcataaaggtg
atactgtcaaccaacattgcagagaccagcatcaccatcaacgatgtagtttatgttatt
gactcttgcaaacagaaggttaagctcttcacctctcacaataacatgaccaactatgca
acagtttgggcttcgaagaccaacttggagcagcgtaaaggccgggctggccgagtacgg
gctggattctgctttcacctgtgcagtcaggctcggtttgagaggctggagactcacctg
accccagagattttccgtactccgctgcatgaagtcgctttgagcatcaagctgctgcgc
ctaggaggaattggaaacttcctgtccaaagccatcgagccaccaccactggatgctgtc
attgaagcggagcacacactgagagacctcgacgctttggacacaaatgacgaactgacg
ccccttggcaggatacttgcaaaattgcctattgagcctcgccttggcaaaatgatgatc
atgggctgtatcctgtatgtgggtgacgcggtgtgtaccatctctgctgccacatgcttt
ccagagccttttgtcagtgatggcaagcgactcggttatgtccacaggaatttttcaggg
aacagattctctgaccatgtcgccctgctttcggtcttccaagcttgggatgatgcaaga
atgggtggtgaagatgcagaaatgagattctgtgagcacaaacgactcaacatggcaaca
cttcggatgacttgggaagccaaagtacaactgaaagatattctggttaatgcaggcttt
ccagaagagtgcttgatgacacaaattttcaacaactctgggcctgacaacaagctggat
gtggttatttctctgctggcctttggtgtctacccaaatgtgtgttaccacaaggagaaa
agaaaaattcttacaacggaggggagaaatgctttaatccacaagtcttctgttaattgc
ccatttaccagccaggacccaaaatatccatctcctttctttgtttttggagagaagata
cggacaagggcaatttctgccaaaagcatgaccatggtgagcccactccagctgcttctg
tttgcctccaaaaaagtaatgtcggacggggaaatggtggtactggatgactggataaag
ctgctcatacctcatgatgctgcagcttacatcacagccttgcgtgcaaccatggaggcc
cttgttgtcgaagttactaaagatccagagatcctttctcaactggacccggggaatgag
caaatgctgaacatgattcgtctgatctccaggccttccacagctggcattaaccttatg
atgggcaatgcaaggtttggagatggtccccgtcctccaaaaatggcccgattagataac
ggagacagtagaggaggtggattccgaggcagaggaggaaattatagtggaggatttaac
tctggagatgcattgggaggttcaggatcctatagaggaggcggtcgaggatttggagct
ggtggaagccgtggaggatatcgaggtggttaccagagtggtggtagtggaggctttggt
ggaggtagaggaggctttggtgggggttatcaaagcagaggaaatcgcggctttggcgga
ggattccggggccaaggaagaggtggattttga
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integrated database retrieval system
